Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01598 ATGGAGCAAAACTTTGTGTTTTCATTCCCCCTCATCATGCTCTTCATTACTCCTTGGTTTCAATTAACCTTTCATGTCAATGCTGAGACTTCAACATACATAGTCCATATGGACAAATCCTTCTTTCCTCAAGTCTTCACAACACATCATGATTGGTTTCAATCCACAGTTCATTCTCTAAACTCAAAAACAGAACTACTTGATCTTGATCAACCATCAAAGCAACAATCAAAGAAAGTAGTTTACACCTATGATCATGCCATGTATGGTTTCAATTCACCAAATGGTCTTTGGCATGCTTCCAATTTTGGTGAAGATATCATTGTTGGTGTTATTGATTCTGGTGTATGGCCTGAGAGTGAAAGCTTTAAAGATCATGGCATGACAAAGAAAATTCCAAGCAAATGGAAAGGAGCATGTGAGGAAGGCCAAGATTTCAATGCTTCCATGTGTAACTTCAAGTTGATTGGAGCTAGATATTTCAACAAAGGTATGATTGCTGCAAATCCAAATGCTACAATCACAATGAACTCACCTAGAGACACGATAGGGCATGGAACTCACACATCGTCTACCGTTGCAGGTAACTATGTTAATGGAGCTTCTTATAATGGTTATGCAAAAGGTGTAGCTAGAGGCATAGCACCACGAGCTAGGCTTGCTATGTACAAAGTAGCTTGGGAAGAGGGTCATTATGCTTCTGATATTTTAGCTGGAATGGACCAAGCAATTtttgatggagttgatgtgatttcaatttcaattggatttgatGAAGTTCCACTTTATGAAGACACTATAGCAATAGCTTCATTTGCAGCTATGGAAAAAGGGATTGTTGTTTCATCTTCAGCAGGAGGTATCTACTCACCAAGTATAGTAATAAATTCAGAAGATGCAAAATCAGTGATCAACTATGCAAAAACGAGTAAGAATCCAACAGCTAGCATTAAATTTCAAGAAACATTTGTTGGAATAAAGCCAGCACCAATTGCAGCAAAATACTCATCAAGAGGACCTTCAAATAGCTATCAAGGAATCTTAAAGCCTGACATAATGGCACCTGGATCAAGAATTCTTGCAGCTTATATTCCTGATGAAACATCGTCAAGCGACTTCGTTTttatgtcaggaacatcaatgtcttgtccacatgtttcaggtgttgctgctcttttgaaagcttcacatccacaatggagtgctgctgctataagatcagcaatgatgacaacagctagttTTTTGGATAATACAAAAACTCCTATAAGGGATAGTGGTTATCTTTTACAATCTGCTTCACCTtttgctattggagctgTTTCACCTGATATACTGGATTTTAGTTATGGAAATGAGAAGAAAAGTTACTATGTTTTCATAAAGTGTGTTGTGTACAATGAGGAAAATGTTTCATTTGGAGATCTTGTTTGGATTGAAGATGGTGGAAAACATAGTGTTAGAAGTCCTATTGTAGTGGCACCAAGTGGAATTTAA 1497 0.3293 MEQNFVFSFPLIMLFITPWFQLTFHVNAETSTYIVHMDKSFFPQVFTTHHDWFQSTVHSLNSKTELLDLDQPSKQQSKKVVYTYDHAMYGFNSPNGLWHASNFGEDIIVGVIDSGVWPESESFKDHGMTKKIPSKWKGACEEGQDFNASMCNFKLIGARYFNKGMIAANPNATITMNSPRDTIGHGTHTSSTVAGNYVNGASYNGYAKGVARGIAPRARLAMYKVAWEEGHYASDILAGMDQAIFDGVDVISISIGFDEVPLYEDTIAIASFAAMEKGIVVSSSAGGIYSPSIVINSEDAKSVINYAKTSKNPTASIKFQETFVGIKPAPIAAKYSSRGPSNSYQGILKPDIMAPGSRILAAYIPDETSSSDFVFMSGTSMSCPHVSGVAALLKASHPQWSAAAIRSAMMTTASFLDNTKTPIRDSGYLLQSASPFAIGAVSPDILDFSYGNEKKSYYVFIKCVVYNEENVSFGDLVWIEDGGKHSVRSPIVVAPSGI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01598 498 PANTHER OS01G0868800 PROTEIN 290 441 - -
Car03g01598 498 Gene3D - 291 324 - -
Car03g01598 498 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 286 IPR045051 -
Car03g01598 498 ProSitePatterns Serine proteases, subtilase family, serine active site. 378 388 IPR023828 -
Car03g01598 498 SUPERFAMILY Subtilisin-like 93 440 IPR036852 GO:0004252|GO:0006508
Car03g01598 498 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 93 IPR037045 -
Car03g01598 498 PANTHER OS01G0868800 PROTEIN 440 494 - -
Car03g01598 498 PANTHER OS01G0868800 PROTEIN 32 286 - -
Car03g01598 498 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 440 494 IPR045051 -
Car03g01598 498 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 290 441 IPR045051 -
Car03g01598 498 PRINTS Subtilisin serine protease family (S8) signature 104 123 IPR015500 -
Car03g01598 498 PRINTS Subtilisin serine protease family (S8) signature 181 194 IPR015500 -
Car03g01598 498 PRINTS Subtilisin serine protease family (S8) signature 377 393 IPR015500 -
Car03g01598 498 Pfam Fibronectin type-III domain 440 493 IPR041469 -
Car03g01598 498 CDD Peptidases_S8_3 93 414 IPR034197 -
Car03g01598 498 ProSiteProfiles Serine proteases, subtilase domain profile. 88 437 - -
Car03g01598 498 Gene3D Peptidase S8/S53 domain 106 286 IPR036852 GO:0004252|GO:0006508
Car03g01598 498 Gene3D Peptidase S8/S53 domain 325 440 IPR036852 GO:0004252|GO:0006508
Car03g01598 498 Pfam Subtilase family 104 417 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01598 Car-Chr3 61731201 61734045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01598 291 418 Subtilisin-like Serine Gene Family AT5G67090 48.175 4.62e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01598 - - mtr:MTR_7g079295 488.034