Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01593 ATGATGGAAAACCAAGACCTCTCACCAAACCCACCACCACTTCTTCAAAACAACAACACTTCTATTCCCTTCTTCTTCACAAACCCTTTGGAATCTCAAGATGATCAAGGCCTTGCAATTGGTGATATAGATATTTGGGGTAACTTTTTCTTAGGCCAAAATAACAACTTGCTTGTTGGGGATGGACCTAAGAAGACATTAATGGATGTTCAATGCACTTCTTCTAATTTGGTGATTAATAATAATAATGAAATAATTAGTGGGAGTTATAAACATGAAGAAGAGGAGGAGGAAAAGCTGATGGGAAACAAAGAGGAGAAAAGGGTTAAAGGTGGGAGAGTGATGAAGAAGACAACAAgagtgccaaggtttgcgtttcaaacgagaagtgttgatgatattttggatgatggttatcgctggaggaaatatggacaaaaagctgtcaagaacaccaaatttccaagaagctactaccgatgcacacatcacacatgcaatgtgaagaaacaagtgcaaaggctatcgaaagatactagcattgtggtgactacttacgagggaattcacaaccacccATGTGAGAAGCTCATGGAAACCCTAACTCCTCTTCTCAAGCAAATACAATTTCTTGCTAGCTTGTAA 645 0.2496 MMENQDLSPNPPPLLQNNNTSIPFFFTNPLESQDDQGLAIGDIDIWGNFFLGQNNNLLVGDGPKKTLMDVQCTSSNLVINNNNEIISGSYKHEEEEEEKLMGNKEEKRVKGGRVMKKTTRVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNTKFPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01593 214 MobiDBLite consensus disorder prediction 1 20 - -
Car03g01593 214 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 93 210 - -
Car03g01593 214 Pfam WRKY DNA -binding domain 136 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01593 214 ProSiteProfiles WRKY domain profile. 130 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01593 214 SUPERFAMILY WRKY DNA-binding domain 129 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01593 214 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 93 210 IPR044810 GO:0003700
Car03g01593 214 Gene3D WRKY domain 120 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01593 214 SMART WRKY_cls 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01593 Car-Chr3 61681682 61683537 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01593 116 214 WRKY Transcription Factor Family AT5G41570 75.758 7.58e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g01593 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01593 - - cam:101497701 407.527