Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01589 ATGGACCAAGATTGGGATCTCCATGCGGTTGTTAGAGGTTGctccaccgtcacctccaccacttccaccaccacttccaccaccacatcTGTCTCTTCTTCCTCTGCTTTTCCCCTGCATCCTCAAGAACCTTCTTGTGGATTTTCTTCAATCTTTGGCTCTGAACAAAAAGCTCAAATTTTGTCACACCCCTTTGAACCAACAAGTTCCTCCATTGAAGAGTTGCATGAACTTTGCAAGCCTTTCTTCTCAACATCACAACCTCTCTCTTTGCAAACTTCTCCTCTGTTTTCTTCATTCTCTTATTCCTCTGCACCACCACCCAAATTAGCTCAaacacaagacaaacaacaacaacaacaacatagaagtaagcaaccacaccaTAGTGGTTCTGTCACTACCCCAAGATCAAAAAGAAGGAAGAACCAACTTAAGAAAGTTTGTCAAGTACCAGTTGAAAATCTCTCTTCAGACATTTGGGCATGGAGGAAATATGGACAAAAACCCATTAAAGGGTCACCATATCCAAGGGGATATTATAGATGTAGTAGTTCAAAAGGGTGTTTAGCAAGAAAACAAGTTGAAAGAAACAGATCAGATCCAACAATGTTCATAGTAACATATACATCTGAACACAATCATCCAGCTCCAACTCACAAAAACTCTCTTGCTGGTTCAACTCGCAACAAGCCATCAACACCTCCTCAATCTGACACAAACAAAGCCCTTACAACAAAACCCTCTTCTCCAACTACTTCAGAAGAGGTTCAAACTCAGGGAGAAAAGTCAGAAAGCAAAGAAGATTTAATGGATGAAGAAGAAGATGATCAATTTGGTTTATCTGATGTTGTTTTATCAGATGATTTCTATGAAAGTTTAGATGAACTGAGTCAACTTGCTGCCTTTGGAGATTGTTTTACAGATCCATTTTCTGCCATTGCAATTCCTACTTGGACTGCTGCTACAGCTGCTGGTGGTAGCTGA 987 0.3607 MDQDWDLHAVVRGCSTVTSTTSTTTSTTTSVSSSSAFPLHPQEPSCGFSSIFGSEQKAQILSHPFEPTSSSIEELHELCKPFFSTSQPLSLQTSPLFSSFSYSSAPPPKLAQTQDKQQQQQHRSKQPHHSGSVTTPRSKRRKNQLKKVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTSEHNHPAPTHKNSLAGSTRNKPSTPPQSDTNKALTTKPSSPTTSEEVQTQGEKSESKEDLMDEEEDDQFGLSDVVLSDDFYESLDELSQLAAFGDCFTDPFSAIAIPTWTAATAAGGS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01589 328 Pfam WRKY DNA -binding domain 159 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01589 328 MobiDBLite consensus disorder prediction 210 281 - -
Car03g01589 328 MobiDBLite consensus disorder prediction 19 38 - -
Car03g01589 328 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01589 328 Gene3D WRKY domain 141 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01589 328 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 328 - -
Car03g01589 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 328 IPR044810 GO:0003700
Car03g01589 328 SUPERFAMILY WRKY DNA-binding domain 155 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01589 328 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01589 328 MobiDBLite consensus disorder prediction 210 259 - -
Car03g01589 328 MobiDBLite consensus disorder prediction 101 149 - -
Car03g01589 328 MobiDBLite consensus disorder prediction 101 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01589 Car-Chr3 61660139 61661901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01589 1 327 WRKY Transcription Factor Family AT4G01250 47.059 5.20e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g01589 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01589 K13425 - gmx:100798084 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01589 03 61660139 61661901 Car07g02789 07 53533429 53536030 PCT