Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01583 ATGGCCACAACTCCTTCTTCGCTTCTACACTCATCTGGCTCCTCTTTTCTTTCTCAATTTCGAACTTTTCCACCCCAATTTTCTTCTTCTACTTCATTTTTCCCTCACAGGTATGGAACTGCAGTGGTGTCGGTGAAAGCCGCGGATTCCGGGGCTGTATTGGTTGAGAAGTCTGAAGCAGAAAATGTTCATAGACTCAAATCAACTTACAATGAGAAAATTGTTCCTTTGCTCATGGAAGAGTTCTCTTACATCAACATTCATCAGGTGCCTAAAGTTAAGAAGATAGTGGTAAATTGTGGTATTGGAGATGCTGCACAAAATGCAAAAGGTTTGGATGCAGCAATTAATGATCTAGCACTGATCACTGGGCAGAGACCTGTTAAGACTCGGGCGAGGAATTCCGTTGCAACCTTCAAGATCAGGGAAGGTCAACCACTTGGGATTGCTGTCACACTCAGAGGAAATATGATGTACTCATTCTTAGACCGCGTTGTGAACTTAGGACTTCCTAGGACAAGAGATTTTCAAGGTGTGAGAATCAACAGCTTTGATGGAAATGGGAATTTCAACATTGGTGTTAAGGACCAGACTGTGTTCCCAGAGCTAAGATCTGCTATTGGTACACCTAGGGGAATGGATATCTGCATCTCAACAACCGCGAAAACCGACCAAGAAGGACAGAGATTATTGGCTCTCATGGGTATGCCCTTCAGAGAGGGAGTTGAAGCTACCTCAGCAATTCGCAAAAAGAAGTTGAAGTCTCATCATTTTGATCCAAAATCAAAGGGAAGAGCAAGGAAGTAA 807 0.4325 MATTPSSLLHSSGSSFLSQFRTFPPQFSSSTSFFPHRYGTAVVSVKAADSGAVLVEKSEAENVHRLKSTYNEKIVPLLMEEFSYINIHQVPKVKKIVVNCGIGDAAQNAKGLDAAINDLALITGQRPVKTRARNSVATFKIREGQPLGIAVTLRGNMMYSFLDRVVNLGLPRTRDFQGVRINSFDGNGNFNIGVKDQTVFPELRSAIGTPRGMDICISTTAKTDQEGQRLLALMGMPFREGVEATSAIRKKKLKSHHFDPKSKGRARK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01583 268 Pfam ribosomal L5P family C-terminus 146 238 IPR031309 -
Car03g01583 268 Hamap 50S ribosomal protein L5 [rplE]. 63 240 IPR020930 GO:0003735|GO:0005840|GO:0006412
Car03g01583 268 SUPERFAMILY RL5-like 65 239 IPR022803 -
Car03g01583 268 ProSitePatterns Ribosomal protein L5 signature. 119 135 IPR020929 GO:0003735|GO:0005840|GO:0006412
Car03g01583 268 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 60 240 - -
Car03g01583 268 Pfam Ribosomal protein L5 86 142 IPR031310 -
Car03g01583 268 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 60 240 IPR002132 GO:0003735|GO:0005840|GO:0006412
Car03g01583 268 Gene3D - 57 240 IPR022803 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01583 92 197 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 30.189 3.87e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01583 K02931 - gmx:100800193 395.201