Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01581 ATGTCGATCTTCGATGGAGCTTTCATCAACACACAACTCTCCAAACACACATCGATCTTCGGTCTCCGTTTATGGGTCGTCATCGGAATCTTAATCGGAGTTCTCATCGTCTTCATCCTCTTCCTCATCTCCCTCTGTGTAGTTTCTCGCCGTCGCCACCGCCGTACCGGCGACTACAAAACCACCGGAGCCACACCAGCGAAGGAAATCCAAAATATCGTACACATTCCAGGACCCCACATGCTCCGGCGACCGGCGCCGGCGAAAGTACCGGAGATCCACGTGGACATCGGAAGACCTGAACACAGGGTTGTTGTTAAATCAGATAGGGTTTCAAGTGGTGAAAGTAAGGGAACAGTGGGAAGTGGGTGCGAAACGACGTCGTCTTTTGGAAGTGGTAGTGTTGGTGGGATTGGACCTGAGGTATCACATCTTGGATGGGGAAGATGGTACACTTTGAGAGAACTTGAAGATGCTACTGGTGGTTTGTGTCCTGAAAATATTCTTGGTGAAGGTGGTTATGGTATTGTTTATCATGGTGTCCTCACTGATGGTACTAAAGTTGCTGTCAAAAACCTCTTGAATAACAAGGGTCAAGCTGAGAAAGAATTCAAAGTAGAGGTTGAAGCAATTGGTCGAGTACGACACAAAAATCTTGTCAGGTTGCTTGGATATTGTGTTGAAGGGGCCTACAGGATGCTTGTGTATGAATATGTAAACAATGGCAATCTAGAACAGTGGCTGCATGGGGATGTTGGACCTGTAAGCCCTTTGACATGGGAAATTCGCATGAATGTTATATTGGGAACAGCAAGAGGATTGGCCTATCTTCATGAGGGTCTTGAGCCGAAGGTTGTTCACCGGGATGTGAAATCAAGCAACATCCTTCTTGATCGTCAATGGAACTCCAAGGTTTCTGATTTCGGGCTTGCTAAGCTTTTGTGTTCCGAGAATAGTTATGTCACAACTCGAGTAATGGGGACATTTGGTTATGTTGCACCGGAATATGCCTGCACTGGAATGTTGACCGAGAAGAGTGATGTTTATAGCTTTGGGATACTTATCATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATGGCAGACCACAAGGAGAGGTAAATTTAATTGAGTGGTTGAAGACTATGGTTGGTAATCGAAAAGCTGAGGAAGTAGTTGATCCAAAGCTACCTGAGATTCCATCTTCAAAGGCTCTTAAACGCGCTCTATTAATTGCTCTTCGTTGCGTTGATCCTGACGCAACAAAGAGGCCTAAAATGGGACATGTCATTCACATGCTTGAGGCAGACGACCTGTTATTCCATAATGAACGCAAAAGCGGGGGAGGAGAGTCTTCGCGATCCCTTAATGATTTTCAACAAGAGCATGAAGACTCAAATTTGGATAAGAGAACAGATGAAGGAATCAGTGTTCAAAGTGAACATGGTAGTGGTAGAAATAATTATCAATCCACTAGGGGGAGATAA 1488 0.4503 MSIFDGAFINTQLSKHTSIFGLRLWVVIGILIGVLIVFILFLISLCVVSRRRHRRTGDYKTTGATPAKEIQNIVHIPGPHMLRRPAPAKVPEIHVDIGRPEHRVVVKSDRVSSGESKGTVGSGCETTSSFGSGSVGGIGPEVSHLGWGRWYTLRELEDATGGLCPENILGEGGYGIVYHGVLTDGTKVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLEQWLHGDVGPVSPLTWEIRMNVILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYGRPQGEVNLIEWLKTMVGNRKAEEVVDPKLPEIPSSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHNERKSGGGESSRSLNDFQQEHEDSNLDKRTDEGISVQSEHGSGRNNYQSTRGR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01581 495 Gene3D Phosphorylase Kinase; domain 1 140 238 - -
Car03g01581 495 SUPERFAMILY Protein kinase-like (PK-like) 142 435 IPR011009 -
Car03g01581 495 PANTHER OS01G0323000 PROTEIN 1 487 - -
Car03g01581 495 MobiDBLite consensus disorder prediction 443 477 - -
Car03g01581 495 SMART serkin_6 163 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01581 495 ProSiteProfiles Protein kinase domain profile. 163 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01581 495 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 487 - -
Car03g01581 495 Gene3D Transferase(Phosphotransferase) domain 1 239 447 - -
Car03g01581 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Car03g01581 495 MobiDBLite consensus disorder prediction 478 495 - -
Car03g01581 495 MobiDBLite consensus disorder prediction 443 495 - -
Car03g01581 495 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Car03g01581 495 CDD STKc_IRAK 169 435 - -
Car03g01581 495 Pfam Protein kinase domain 167 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01581 Car-Chr3 61509746 61513919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01581 26 435 Trihelix Transcription Factor Family AT5G38560 39.663 5.59e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Car03g01581 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01581 - - gmx:100817295 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01581 03 61509746 61513919 Car07g02782 07 53390782 53393714 PCT