Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01579 ATGTCTCATAACTCAGATGACAACAACAACATCAAGGGAGTTTTTACTCATGGTGGACGATATATTCAGTACAATATCTATGGTAACCTCTTTGAAGTCTCTAATAAGTATGTTCCTCCTATCCGTCCTGTTGGAAGAGGTGCTTATGGTATTGTTTGTGCTGCTGTAAATGCGGAGACTCGGGAAGAAGTTGCCATTAAGAAGATTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATTAAACTTCTCCGCCACATGGATCATATAAATGTGATAACCCTTAAGGACATTATACGTCCACCACTGATGGAGGATTTCAACGATGTTTACATTATTTATGAGTTAATGGATACTGATCTGCATCAAATAATTCATTCCAATCAACCATTGACTAATGATCATTGTCGGTATTTACTGTGTCAGTTGTTACGAGGACTGAAATATGTACACTCGGCGAATGTTCTGCACCGTGATCTAAAGCCTAGCAACTTGCTGCTGAATTCCAATTGTCATCTTAAGATTGCAGACTTCGGTCTAGCTAGAACTACGTCTGAAACCGATTTCATGACCGAGTATGTGGTTACTCGATGGTACCGAGCTCCAGAATTGCTTCTAAATTGTTCGGAATATACTGCAGCCATTGATATATGGTCTGTTGGTTGCATCCTTGGTGAAATCATGACAAGACAACCCCTATTTCCTGGGAAAGATTATGTTCATCAACTCAGATTGATCACAGAGCTTATAGGTTCTCCTGATGACACCAGCCTTGGATTTCTGCGAAGTGATGATGCTCGTAGATATTTAAAACAGCTTCCTCAATATCCAAGGCAGCAATTTGCTGCTAGATTTCCCAACATGTCTCCTGGTGCAGTTGATTTGTTAGAGAAGATGCTTGTTTTTGATCCGAACAGGCGCATTACAGTTGATGAGGCTCTGTGCCACCAATACTTGGCACCTCTCCATGACATTATTGAGGAACCTGTTTGTTCTAAACCTTTCAATTTTGATTTTGAGAACTCGtctttcactgaagaaaatatcaaggaacacatttggagagaatctgtgaaGTTCAATCCTGATCCACCTATTTATTGA 1119 0.3852 MSHNSDDNNNIKGVFTHGGRYIQYNIYGNLFEVSNKYVPPIRPVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHINVITLKDIIRPPLMEDFNDVYIIYELMDTDLHQIIHSNQPLTNDHCRYLLCQLLRGLKYVHSANVLHRDLKPSNLLLNSNCHLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDDARRYLKQLPQYPRQQFAARFPNMSPGAVDLLEKMLVFDPNRRITVDEALCHQYLAPLHDIIEEPVCSKPFNFDFENSSFTEENIKEHIWRESVKFNPDPPIY 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01579 372 SMART serkin_6 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01579 372 CDD STKc_TEY_MAPK 31 367 - -
Car03g01579 372 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Car03g01579 372 Gene3D Phosphorylase Kinase; domain 1 21 361 - -
Car03g01579 372 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01579 372 SUPERFAMILY Protein kinase-like (PK-like) 41 331 IPR011009 -
Car03g01579 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 14 370 - -
Car03g01579 372 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car03g01579 372 Pfam Protein kinase domain 42 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01579 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 370 - -
Car03g01579 372 Gene3D Transferase(Phosphotransferase) domain 1 122 351 - -
Car03g01579 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01579 Car-Chr3 61492426 61495306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01579 4 367 MAP Kinase Gene Family AT4G01370 84.615 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car03g01579 Pkinase 1.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01579 K20600 - csin:114309362 676.396