Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01574 ATGGCCAAAAAATATGATGGACCTGCCATTGATCTTGGAACGACCTATTCATGCGTAGCAGTTTGGCAAGAGCATAACAATCGAACTGAGATGATCCACAATGATCAAGGCAATAGAATCACACCTTCTTTTGTTGCTTTCCGTGACTCAAAAAGGTTGCTTGGCAATGCTGCTAAAAATCAGGCTGCCTCTAACCCAACCAACACTATCTTTGAGGAAATATCATCTATGATCCTCTCAAAGATGCAGGAGATTGTAGAGAAGTTTCTGGAATTACCTGTGAAGAATGCAGTGATTACTGTGCCGGATGATAGCTTTGAAGTAAAGGCCACTGCCGGTGATACTCACCTAGGTGGAGAAAACTTAGACAATAGAATGGTGAGCCACTTTGTGAAGGAGTTGAAGAGGAAGAACAATGTGGAAGGATTTGGGCACGAGCATCAACCTGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAAGCTGCTTTGTTGAATGAAGGCATTAAGAATGCTACAAATGTGGTCTTGCAAGATATTACTCCCCTGTCACTTGGTATATTGACAAAAGGAGATATCACGAGTGTGGTGATTCCTAAGAACATTCATGTCAAGACGACAGAAGGCAGATGTAAGACAAGTGCGGATACCCAATTTGGCATCTCGATTAATGTTTATGAGGGCGAGAGAGTAAGAGCCAGAGAGAACAATTTGCTAGATGTAGATGGTATATTAAATGTCACTGCTGAGGAAGAAACCACAGGGAATAAGAAAGAGATTACAATAACAAATGAAAATAGAAGACTATCAACTGAAGAAATTGAAAGAATGCTCCAAAAAGCTGAGAATAGGCTGAAGATATGA 861 0.4111 MAKKYDGPAIDLGTTYSCVAVWQEHNNRTEMIHNDQGNRITPSFVAFRDSKRLLGNAAKNQAASNPTNTIFEEISSMILSKMQEIVEKFLELPVKNAVITVPDDSFEVKATAGDTHLGGENLDNRMVSHFVKELKRKNNVEGFGHEHQPDEAVAYGAAVQAALLNEGIKNATNVVLQDITPLSLGILTKGDITSVVIPKNIHVKTTEGRCKTSADTQFGISINVYEGERVRARENNLLDVDGILNVTAEEETTGNKKEITITNENRRLSTEEIERMLQKAENRLKI 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01574 286 ProSitePatterns Heat shock hsp70 proteins family signature 1. 10 17 IPR018181 -
Car03g01574 286 Gene3D - 108 117 - -
Car03g01574 286 Pfam Hsp70 protein 72 102 IPR013126 GO:0005524|GO:0140662
Car03g01574 286 Pfam Hsp70 protein 148 238 IPR013126 GO:0005524|GO:0140662
Car03g01574 286 Pfam Hsp70 protein 105 141 IPR013126 GO:0005524|GO:0140662
Car03g01574 286 Pfam Hsp70 protein 10 71 IPR013126 GO:0005524|GO:0140662
Car03g01574 286 Gene3D - 72 107 - -
Car03g01574 286 Coils Coil 263 283 - -
Car03g01574 286 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 239 285 IPR029047 -
Car03g01574 286 PANTHER HEAT SHOCK PROTEIN 70KDA 72 102 IPR013126 GO:0005524|GO:0140662
Car03g01574 286 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 171 282 IPR029047 -
Car03g01574 286 PANTHER HEAT SHOCK 70 KDA PROTEIN 72 102 - -
Car03g01574 286 SUPERFAMILY Actin-like ATPase domain 9 104 IPR043129 -
Car03g01574 286 Gene3D Actin; Chain A, domain 4 118 141 - -
Car03g01574 286 Gene3D - 7 71 - -
Car03g01574 286 PANTHER HEAT SHOCK 70 KDA PROTEIN 9 71 - -
Car03g01574 286 SUPERFAMILY Actin-like ATPase domain 97 140 IPR043129 -
Car03g01574 286 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 158 238 IPR029047 -
Car03g01574 286 PANTHER HEAT SHOCK 70 KDA PROTEIN 238 282 - -
Car03g01574 286 PANTHER HEAT SHOCK 70 KDA PROTEIN 148 239 - -
Car03g01574 286 PANTHER HEAT SHOCK 70 KDA PROTEIN 100 141 - -
Car03g01574 286 PANTHER HEAT SHOCK PROTEIN 70KDA 100 141 IPR013126 GO:0005524|GO:0140662
Car03g01574 286 PRINTS 70kDa heat shock protein signature 36 48 - -
Car03g01574 286 PRINTS 70kDa heat shock protein signature 6 19 - -
Car03g01574 286 PRINTS 70kDa heat shock protein signature 58 66 - -
Car03g01574 286 PANTHER HEAT SHOCK PROTEIN 70KDA 148 239 IPR013126 GO:0005524|GO:0140662
Car03g01574 286 PANTHER HEAT SHOCK PROTEIN 70KDA 9 71 IPR013126 GO:0005524|GO:0140662
Car03g01574 286 PANTHER HEAT SHOCK PROTEIN 70KDA 238 282 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01574 Car-Chr3 61437163 61438571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01574 67 281 Calmodulin-binding Proteins AT3G12580 39.004 3.90e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01574 K03283 - sasa:106607232 194.512