Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01571 ATGGGATTCCCCGTAGGGTACCCTGAAGTATCCGTCCCCAAAGTCTTCCTCTACATTCTTTCTCTCCTCGCTTTTCTAAGATCCCTAGCTCTCTCCTTCATTTCTCTTCTCCATCTCTCCGACCTCCTCGACACCGATTTCTCCGCCGCTACCCTACCGGAATCAAACTCCCACCGTCCCACCCTCTCGGCAATCCTCATCTGTGAATTCCTCCCAGTCGTAAGTTTCAGCAAAATTGCTGGAGATTCGCCGCCGTCGGGGTGTGCGGTGTGTCTGAACGAGTTTGCCGGAGAGGAAGAGATCAGGTGTATGGCGAACTGCAGACATATATTCCACCGGACGTGTGTGGACCGTTGGATTGATCATGATCAGAAGCTGTGCCCACTTTGTAGGACCCACTTCGTGCCTGATCATAAAATGGAATATTATAATCAACGGCTGTGGGCTGCTTCTGAATCTGAAGATGATGTTTCTCTTTTTTCTCAACGCGCGTGA 495 0.5051 MGFPVGYPEVSVPKVFLYILSLLAFLRSLALSFISLLHLSDLLDTDFSAATLPESNSHRPTLSAILICEFLPVVSFSKIAGDSPPSGCAVCLNEFAGEEEIRCMANCRHIFHRTCVDRWIDHDQKLCPLCRTHFVPDHKMEYYNQRLWAASESEDDVSLFSQRA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01571 164 SMART ring_2 88 130 IPR001841 -
Car03g01571 164 Pfam Ring finger domain 88 131 IPR001841 -
Car03g01571 164 ProSiteProfiles Zinc finger RING-type profile. 88 131 IPR001841 -
Car03g01571 164 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 163 - -
Car03g01571 164 SUPERFAMILY RING/U-box 87 140 - -
Car03g01571 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 163 - -
Car03g01571 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 137 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01571 Car-Chr3 61394379 61395536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01571 1 153 C3H Transcription Factor Family AT1G63840 46.497 4.25e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01571 K16281 K16282 gmx:100813224 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01571 03 61394379 61395536 Car07g02772 07 53230899 53231865 PCT