Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01567 ATGTTGGGTAGTGAGCAACCTTTGGATTTGTATAAGCTTTTCATGGTAGTGAAGGACAAAGGTGGTTATGATGTTGTTTGTAAGAATCGGTTGTGGGATTTGGTTGGTGAAGAATATGGATTAGGTGTGAAAGTTGGTTCATCTGTTGAACTGGTCTATAGTAAGTATTTGAGTACTCTAGAGACACCTTTGAAGAATGTTGTTGATGATGAGGTTGCTAAGTGTGGTTTAGTCGATGATAGAGTTAAATTTGGTGAGCGTTTGATGGAGTTGCAAGCTGAATTCTTGCTGGATGATTATGGTGAGGAAGATGCGGGCGATGAACTTGAGAGTGTATATGACTGTGGGAGGAAGTTGTGTGGTACTAATAGAGTGAAGGGTGTGAATTCAAAAGTGTATGACTATTTAGATGGGAGGAAGTTGCGTGGTGCTAATAGAATGAAGGACGCGAATCTTGAGTCTAATGCGGCCAAGAAAGTTAAGAATGGAGGACTTGTCGATATGCATATGGAGGAGTTGGATGGGAACAAAATATTGGCAGTGGATGTATCCAACACAGTAAACAAAATGCCCGGATTGTCAGATGGAAGCAAGAGGCATGATAGTGATGACAATGCTGACAGTGTTGATGATGTCTTGATATTGGATCCTTCTAGTGTTAATAGAGAGAACTTTGGTAGGAAGAGGAAGAGAGAGTCTATGTCAGAAGTGCTAAGTTGGGTTACTAGAACTGCAAAGAATCCTTGTGATCCTGTTGTAGGTTCAATACCTGAAAAGTCAAAGTGGAAGTCTTGCCGTAATGAAGAGATCTGGAAGAAGGTTTTGTTGTTTCGAGAATCAGTCTTTTTGAAAAAAGATTTTGGATCAAACTGTGAAAAGCTCAGTTGGCTGGCTCAGAGGATGCATCCTGCCATGTATGATGATAATTTTGGGGCAACTTACAATCTTAGACAGAGAATCAAATGTGACAATGGACTTTTAGCTGGAAAATCTGCATCTAAGGGAATATTTTCACGTATGCAAAGAACACCAAGTCCGCATACCGACGACCGTGCCAAGAAAAAGTTACTTGACTCAAGTGCTCCAGAATCAAGTCTTGATACACCTGCCACAGTGAACATCCCTCTTGGACCAAATCATCAAGCTGAAGTGCCCAAATGGACCGGCACGACTCATGAAAGTGATTCTAAGTGGTTAGGAACCCAAATATGGCCACAAAAATCTGCAAAATCAAACCTCTTAGAAAGGGACCCTATCGGAAAAGGAGGGGAAGATTCATGTGGTTGCCATGTACAAGGTTCCGTTGAGTGTGTTAGATTTCACATTGCTGAGAAAAGGGCTAAAGTTAAGCTGGAATTAGGTGTAGCCTTTTACCAATGGAATTTAGATAAGGTAGGCGAAGATGTTAGGCGATGGTGGACCCTTCCAGAAGAGGAGAAGTTCAATGATATAGTGAAATCGAACCCTGCTTCGCTGGATAGATGTTTCTGGGACGATATTTTTAAAACATTTCCTAAGAAGAGTAGGGAAAATTTGGTCAGCTATTACTTTAATGTCTTTCTTTTGCAGCGCCGAGGATACCAGAATAGGCACACTCCAGATAACATTGATAGCGATGATGATGAATCGGAATTTACACCGTTGAGGGGTGTTTTTGGACATAAAAAAAATAAATCAAACATCACCTTATTATCCCCTAAGAAGCCACAGTCAAAGCCACATACAAAGGGAAGATAG 1737 0.4099 MLGSEQPLDLYKLFMVVKDKGGYDVVCKNRLWDLVGEEYGLGVKVGSSVELVYSKYLSTLETPLKNVVDDEVAKCGLVDDRVKFGERLMELQAEFLLDDYGEEDAGDELESVYDCGRKLCGTNRVKGVNSKVYDYLDGRKLRGANRMKDANLESNAAKKVKNGGLVDMHMEELDGNKILAVDVSNTVNKMPGLSDGSKRHDSDDNADSVDDVLILDPSSVNRENFGRKRKRESMSEVLSWVTRTAKNPCDPVVGSIPEKSKWKSCRNEEIWKKVLLFRESVFLKKDFGSNCEKLSWLAQRMHPAMYDDNFGATYNLRQRIKCDNGLLAGKSASKGIFSRMQRTPSPHTDDRAKKKLLDSSAPESSLDTPATVNIPLGPNHQAEVPKWTGTTHESDSKWLGTQIWPQKSAKSNLLERDPIGKGGEDSCGCHVQGSVECVRFHIAEKRAKVKLELGVAFYQWNLDKVGEDVRRWWTLPEEEKFNDIVKSNPASLDRCFWDDIFKTFPKKSRENLVSYYFNVFLLQRRGYQNRHTPDNIDSDDDESEFTPLRGVFGHKKNKSNITLLSPKKPQSKPHTKGR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01567 578 SMART bright_3 2 66 IPR001606 GO:0003677
Car03g01567 578 Pfam ARID/BRIGHT DNA binding domain 5 60 IPR001606 GO:0003677
Car03g01567 578 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 572 - -
Car03g01567 578 CDD ARID 6 61 - -
Car03g01567 578 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Car03g01567 578 MobiDBLite consensus disorder prediction 531 578 - -
Car03g01567 578 MobiDBLite consensus disorder prediction 531 551 - -
Car03g01567 578 Gene3D - 2 74 IPR036431 GO:0003677
Car03g01567 578 SUPERFAMILY ARID-like 5 67 IPR036431 GO:0003677
Car03g01567 578 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 1 572 - -
Car03g01567 578 MobiDBLite consensus disorder prediction 361 375 - -
Car03g01567 578 MobiDBLite consensus disorder prediction 344 360 - -
Car03g01567 578 MobiDBLite consensus disorder prediction 335 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01567 Car-Chr3 61337125 61342898 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Car03g01567 ARID 3.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01567 - - mtr:MTR_7g078120 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01567 03 61337125 61342898 Car07g02764 07 53085494 53089452 PCT