Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01558 ATGGATAAAGAGGAAGAAGCCCCACAAATCCCTCGGAGAACGACCAGGTCTTTATATTCATCTTCAGCATCCACTTCAAATATTGTACCTGCAGCAAAAGTAAGCAATCTTGAAGCCCTAACAATTAATGACCTTTTAGTTGGAGGAGACCCTATTAGCCTAGATGATATAACTTCCAGTTTTCCTGGTAGAAGTAGCCAGATTCATGAGGTCGTGCGTCTTCTGGGACCTTTAAATTCACCTTTACTTCCTTTGTTTGTGTATGGAGGTGCTTCTACTGGAAAAACCAGTATCATTCTTCAAATATTCAGACATCTCAAAAGGCCGCTTGTTTATTCTAGTTGTAGGACGTGTTATAACCAGCGTATCTTGTTTGAATCTGTTCTTAATCAGTTACTTCTCCATAGAAAAAACATGGCCAATTCTTATACAAATGCAAAGCGCTGTGAAAGACCGTCTGATTTTGTCAATTTTCTCCGTGAAGCATTGACCGGCATTGTAAACAATCTGAAGGAGAAATCAGAGAAGTTAATCTCTGAAAAGAAGACTCATGATGGGGGAATGGGAAATATGATCTATTTGGTATTTGACAATTTTCATCTTGTTAGAGAGTGGGATAAAAGTTCGACTATATTGCCGTTACTGTTTAATCTCTATGACATGCTAAAGATTCCCGAGGTGAGTTTGATTTTCATCAGCAGTACTTCACCGGATACATTTTACTCTAACATGGGTTATGTGGAACCTATCCCCATTTACTTTCCTGATTACACAGAAGGTGATATTCGTCAAATATTATTGAGAAATCAAGCGAACCAGAAGTTGTATTCCTCATTTCTCGATGTAGCTCTGAAACCTTTCTGTAGAATTACTAGGCAGGTTGGTGAATTGGCTACTGCCTTAAAGCCACTATATGAACAATATTGTGAACCTTTAAGTGATAAGGGAAAAGGAGTTCTCCCTAGTGAAGACATGAAGCGGCGGCTATTCAATCATATCAAGCCTCATATTGCCTCCTCTCTGAATGATGTATTTAAGGTTTCATCTCCTTCTTCACGTGAAGTTGAGACCAGTAAAGAGACAAAGCTTAAGGGGAATCCGAAGAGATCGGAGGAAATAGCTGACCTTGATTTTCATATGTCTACTAGTGCAAAGTATCTTCTTATTTCTGCATTTCTTGCCTCCAGAAACCCTGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGTTCTGATAATCGAAAGCGAAAGAGGAAGGCCTCTGAGAAAGCGCTCGAAAAGAAGGAACTTTTAGAAGAGGAACTACTAATGAAAGGACCTGGAACTTTCCCATTGGAGAGGTTGATAGCCATCTTTCAGTGTATTGTATCAGTTGCGGATGAACCATCTGATGAGGACGAACAAAACAATGAAGAATTAGGAGCTCAATGTGGCAATGGTTCACTGATGTCTGACGTTCTTTTGCAGCTATCCACTCTCTGCAATGCTAATTTTATTTTCAAAGGAAAAAGCTGTCCAATTGAAGGCTCGACTCGGTATCGATCAACTATATCTGAAAACATGGCCTTAAAGGTTGCAAGGAGCCTTAAGTTCCCATTGTCAAAGTATTTGTACAGAAGTTAG 1626 0.3954 MDKEEEAPQIPRRTTRSLYSSSASTSNIVPAAKVSNLEALTINDLLVGGDPISLDDITSSFPGRSSQIHEVVRLLGPLNSPLLPLFVYGGASTGKTSIILQIFRHLKRPLVYSSCRTCYNQRILFESVLNQLLLHRKNMANSYTNAKRCERPSDFVNFLREALTGIVNNLKEKSEKLISEKKTHDGGMGNMIYLVFDNFHLVREWDKSSTILPLLFNLYDMLKIPEVSLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEGDIRQILLRNQANQKLYSSFLDVALKPFCRITRQVGELATALKPLYEQYCEPLSDKGKGVLPSEDMKRRLFNHIKPHIASSLNDVFKVSSPSSREVETSKETKLKGNPKRSEEIADLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKASEKALEKKELLEEELLMKGPGTFPLERLIAIFQCIVSVADEPSDEDEQNNEELGAQCGNGSLMSDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISENMALKVARSLKFPLSKYLYRS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01558 541 Coils Coil 415 435 - -
Car03g01558 541 MobiDBLite consensus disorder prediction 350 369 - -
Car03g01558 541 Coils Coil 160 180 - -
Car03g01558 541 MobiDBLite consensus disorder prediction 353 369 - -
Car03g01558 541 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 53 540 IPR020796 GO:0000808|GO:0005634|GO:0006260
Car03g01558 541 MobiDBLite consensus disorder prediction 1 21 - -
Car03g01558 541 Gene3D - 61 243 IPR027417 -
Car03g01558 541 Pfam AAA ATPase domain 61 218 IPR041664 -
Car03g01558 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 274 IPR027417 -
Car03g01558 541 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 252 538 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01558 1 540 Core DNA Replication Machinery Family AT4G29910 57.934 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01558 K02607 - gmx:100782175 818.15