Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01546 ATGGCAACTGATATGCAAAGGCTGGTTGGAatgagtgaggatgatgaagaagaaatgggaatgggtgtgaaagacgaggatgatgaggatgacgattacgaggaaaatggaggtgagcatgGAAATGTTTCAGGGATGGTAGAGATTGATGGTGGGAGTGGGATAGGAACTGCTGCTGGTGACAACAGTTTTCAGCAGCACCACCAGTTTCAAGAGCAAGTAGGCACTCCGGGTGGAGGTACTCGAAGATCTAGACCGGTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGTCGGCGGGCTATAACTGCAAGGATCTTGGCAGGGCTTCGCAGGCATGGAAACTATAATCTTAGAGTTAGGGCTGACATAAATGATGTTATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCGGATGGTACTACTTTTCCCTCAAGATCTCAGGGTCAGATGCCAGCTGGTGGCAATTCTACAGTTGTTACATCATCGTCTTCCCACGTGCCTTCCCAACAGCCTCCATCTGTTTCCCTCAAGGGAGTTGCTTCTGGCTATAGGAGCCCTTTAGAGTACAGTGCATGTCCAAGTAAAGGTGTTTTCATACCATCTCCATCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCTATGTTGGGGGATGGAGAAGTACAAAGAGACAATCCTCCTGTGATTGGCGGTTCAATAGACACCATCAATGAGACACAGATTGGTGATATTCCCCCCAGATTACCAGAGCGCAATTTTGCTGGGACTCCATATGTTCCTGTTTATGTGATGCTACCGTTGGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCGGATGCTCTACTAAAGCAGCTGAGGGTGTTGAAATCAGCAAATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCTCAAGAGTATAATTGGAATGGTTACAAGAGACTCTTCCAAATGCTGCGTGAGCTTAAGCTTAAGCTGCAGGTAGTAATGTCTTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAAATTGGTAGGAGTAATCCTGATATTTTTTTCACTGATAGAGAGGGAAGACACAACCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGTGTTTTGAGAGGTCGGACTGCTGTGGAGGTTTATTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATCAGTTTTTTGAGGATGGCTTCATCTCCATGATTGAAGTTGGATTAGGTCCATGTGGAGAGCTAAGATATCCATCTTGTACTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGCAGCAGAAGCAAGAGGGCACACTATTTGGGCTAGAGGGCCAGATAATGTGGGTACCTATAATTCTCAGCCACACGAAACAGGTTTCTTCTGCGACGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTCAACTGGTATTCTCAAGTTTTAGTTGATCATGGAAACCGGGTACTTTCTTTGGCAAAATTAGCTTTTGAGGGATCCTGCATTGCTGCAAAGCTATCAGGTATTTATTGGTGGTACAAGACTGCTAGTCATGCTGCTGAATTAACTGCTGGGTATTATAATCCATGCAATCGTGATGGCTATGCTGCAATTATGGAAATGTTAAAGAGAAATGGAGTTAGCTTAAACATTGCTTGTGTTGACCCGCACTCATTGAATCAACACGAGGGCTTTTCTGAGCCATTTGCAGATCCTGAGAGATTAGTTTGGCAAGTGCTGAATGCTGGGTGGGATGTTGGACTACCTGTCATCAGTGAGAATGCACTTCCTTGCCTAAACAGAGTTAGCTATAACAAGATTTTGGATAATACCAAGCCCGTGAGTGATCCAGATGGAAGGCACTTTTCATCCTTTACTTACCTGAGGCTCAGTTCACTTCTTATGGAACGACAAAACTTCACAGAGTTTGAACGATTTGTCAAGAGAATGCATGGAGAAGCTGTTCTTGATCTTCAGTTATAA 2112 0.4223 MATDMQRLVGMSEDDEEEMGMGVKDEDDEDDDYEENGGEHGNVSGMVEIDGGSGIGTAAGDNSFQQHHQFQEQVGTPGGGTRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQMPAGGNSTVVTSSSSHVPSQQPPSVSLKGVASGYRSPLEYSACPSKGVFIPSPSPYDLSSSSRSQTSMLGDGEVQRDNPPVIGGSIDTINETQIGDIPPRLPERNFAGTPYVPVYVMLPLGVINIKCELVDPDALLKQLRVLKSANVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMLRELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFDQFFEDGFISMIEVGLGPCGELRYPSCTVKHGWRYPGIGEFQCYDQYMLKSLRKAAEARGHTIWARGPDNVGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQVLVDHGNRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIMEMLKRNGVSLNIACVDPHSLNQHEGFSEPFADPERLVWQVLNAGWDVGLPVISENALPCLNRVSYNKILDNTKPVSDPDGRHFSSFTYLRLSSLLMERQNFTEFERFVKRMHGEAVLDLQL 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01546 703 MobiDBLite consensus disorder prediction 148 181 - -
Car03g01546 703 MobiDBLite consensus disorder prediction 208 226 - -
Car03g01546 703 Pfam Glycosyl hydrolase family 14 269 689 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Plant beta-amylase signature 426 435 IPR001371 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Plant beta-amylase signature 669 683 IPR001371 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Plant beta-amylase signature 684 698 IPR001371 GO:0000272|GO:0016161
Car03g01546 703 MobiDBLite consensus disorder prediction 208 233 - -
Car03g01546 703 PANTHER BETA-AMYLASE 77 703 - -
Car03g01546 703 Gene3D Glycosidases 257 702 - -
Car03g01546 703 SUPERFAMILY (Trans)glycosidases 260 699 IPR017853 -
Car03g01546 703 MobiDBLite consensus disorder prediction 15 36 - -
Car03g01546 703 Pfam BES1/BZR1 plant transcription factor, N-terminal 80 214 IPR008540 -
Car03g01546 703 MobiDBLite consensus disorder prediction 1 97 - -
Car03g01546 703 MobiDBLite consensus disorder prediction 58 78 - -
Car03g01546 703 PANTHER - 77 703 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 MobiDBLite consensus disorder prediction 148 182 - -
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 300 314 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 321 339 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 343 364 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 436 458 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 509 528 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 543 559 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 560 571 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 578 601 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 618 640 IPR001554 GO:0000272|GO:0016161
Car03g01546 703 MobiDBLite consensus disorder prediction 83 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01546 Car-Chr3 61026820 61033735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01546 1 700 Glycoside Hydrolase AT2G45880 64.723 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Car03g01546 Glyco_hydro_14 1.2e-103 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01546 K01177 - gmx:100805560 1177.93