Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01541 ATGGGGATTCAGTGCTCCAGCCTCGTGCCATGTTGTGTCGACTCCCACGTTAAGGCATCTACTCTTGAAGTTCCTAATGCCGAGAATGAGGACAGAATTGAGGCCAATAATGGTCGTGCATTTCGTGAATTTACGTTGGAGCAACTTAATAATGCAACATCTGGTTTTAATGTTGAGAATATAGTATCTGAACACGGTGAAAAGGCTCCAAATGTTGTTTATAAAGGGAAGATGGAGAATCAAACGAGGATTGTTGTTAAGAGGTTTAATAGAAGTGCTTGGCCTGATACTCAACAGTTTTTGGAGGAAGCTAGATCAGTTGGTCAGCTTCGTAACCAAAGATTGGCAAATCTGCTTGGTTGTTGTTGTGAAGGCGATGAGAGGTTGCTTGTGGCCGAATACATGCCCAATGAAACTCTTGCAAAACACCTTTTCCACTGGGATGCACAACCGATGAAATGGGCAATGCGACTCAGAGTTGTTCTACATCTCGCAGAAGCTCTAGAATACTGTACAAGCAACGGACGTGGCCTCTATCACGACCTTAATGCATATAGAGTTCTATTTGATGAAGATGGTAATCCTAGACTTTCAAGTTTTGGCCTTATGAAGAATAGTAGAGATGGTAAAAGTTATAGCACAAATTTGGCATTTACCCCTCCAGAGTATCTCAGAACCGGGCGAGTAACACCGGAAAGTGTAATATATAGCTTTGGCACTCTTTTGCTTGACCTTCTTAGTGGGAAGCATATCCCCCCAAGTCATGCCCTTGATTTGATTCGCGACAGAAATCTTCAGATGCTAACAGATTCTTGTTTGGAAGGACAATTTTCTGAGGATGATGGAACTGAGTTGGTGCGCTTGGCATCTCGATGTTTACAGTATGAACCTAGAGAACGGCCTAATACAAAATCATTAGTGGCTGCTTTAGCTCCTCTGCAGAAAGAAACAGAGGTTCCTTCTCACTCATTGATGGGTATCCAAAATAGTGCCACTACTGTTGCTTCCTTGTCGCCACTTGGTGACGCATGTTCAAGAAAGGACTTGACTGCTATACATGAAGTTCTCGAAAATATTGGCTATAAAGATGACGAAGGAGTGGCAAACGAGTTATCTTTCCAAATGTGGACTGATCAAATGCAAGACTCGCTAAATTGTAAGCAAAAAGGGGATGCTGCTTTCCGGCAGAAAGACTTAAAACTAGCAATAGAGTGCTACACGCAGTTCATTGATGTTGGAACAATGGTTTCGCCAACTGTCCATGCGCGTCGCAGCTTGTGTTATCTCATCAACGACATGCCTCAGGAAGCAATGAACGATGCGATGCAAGCACAAGTAATTTCCCCTCTATGGCACATTGCGTCTTATCTTCAATCTGTTTCTTTGGCTGGACTAGGGATGGAGAGCGAAGCTCAAGTCGCGCTTATGGAGGGAACAACACTTGAAGCCAAACGAAATACAGGAAAAAAGTGA 1473 0.4331 MGIQCSSLVPCCVDSHVKASTLEVPNAENEDRIEANNGRAFREFTLEQLNNATSGFNVENIVSEHGEKAPNVVYKGKMENQTRIVVKRFNRSAWPDTQQFLEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWDAQPMKWAMRLRVVLHLAEALEYCTSNGRGLYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSEDDGTELVRLASRCLQYEPRERPNTKSLVAALAPLQKETEVPSHSLMGIQNSATTVASLSPLGDACSRKDLTAIHEVLENIGYKDDEGVANELSFQMWTDQMQDSLNCKQKGDAAFRQKDLKLAIECYTQFIDVGTMVSPTVHARRSLCYLINDMPQEAMNDAMQAQVISPLWHIASYLQSVSLAGLGMESEAQVALMEGTTLEAKRNTGKK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01541 490 SUPERFAMILY Protein kinase-like (PK-like) 39 316 IPR011009 -
Car03g01541 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
Car03g01541 490 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01541 490 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Car03g01541 490 SUPERFAMILY TPR-like 382 478 IPR011990 GO:0005515
Car03g01541 490 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Car03g01541 490 Gene3D Tetratricopeptide repeat domain 382 490 IPR011990 GO:0005515
Car03g01541 490 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Car03g01541 490 PANTHER LRR RECEPTOR-LIKE KINASE 1 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01541 Car-Chr3 60960979 60966604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01541 21 313 Glycoside Hydrolase AT3G07070 33.645 6.83e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Car03g01541 PK_Tyr_Ser-Thr 1.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01541 K14500 - gmx:100781311 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01541 03 60960979 60966604 Car03g01541 03 60960979 60966604 ECH