Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01532 ATGGGAAGGACACCATGTTGTGAGAAGAAAGGTTTGAAGAAAGGACCTTGGACTACTGAAGAGGATGAAATTCTTGCTAACTATATCAACAAGAATGGTGGTCATGGAAGCTGGCATGAACTCCCCAAGATCACAGGTCTTCTTCGTTGTGGTAAGAGTTGCAGGCTTAGATGGACTAACTATCTTAGACCTGACATTAAACGTGGACCCTTTACTCCTGAGGAAGAAAAACTAGTCATACAACTTCATGCCATCCTAGGAAATAGGTGGGCTGCAATTGCATCTCAATTACCAGGAAGAACAGACAACGAGATAAAGAACTTCTGGAACACACATTTGAAGAAACGTCTGGAAAGCATGGGAATCGATCCAAAAACACACGAGCCAGTAGCTTCATCAACAAGTTACCCCAATCACAATTCACATTCATCAGTTTCCACACGTCACATGGCTCAATGGGAAAGTGCAAGGCTTGAAGCAGAAGCAAGACTCTCAATAGACACATCAAACTTcaacaacaacaacaacaagagcaagaaTCCTAATTCCATTTCCGAAACCGATTCTTCCGACTACTTTCTCCGAATATGGAACTCTGCAGTTGGAGATGCATTTCGCGATATTCGCAAACATGATACTGATAATAATAAATACAAAACTAGTTGCTGTCAGAGTCCTAGTTCTGCAGTTACAGCAGAATTAGCTTCTAATAACCAATTAAGCAATGGTGTGAAAGAAGAGTTTGAGTGGAGAAATTATAAGTTTTGTGTTGAAGATATGATTCATGGATCTGATTCATCAAGCTCTAATGACTTAGAAGATTCACCAGACACTGCTTTGCAGCTCTTGTTGGATTTTCCTATGAACAATGACATGAGTTTCTTAGAAAACTCTTTTGATTGTCCCCTATAG 912 0.3904 MGRTPCCEKKGLKKGPWTTEEDEILANYINKNGGHGSWHELPKITGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHAILGNRWAAIASQLPGRTDNEIKNFWNTHLKKRLESMGIDPKTHEPVASSTSYPNHNSHSSVSTRHMAQWESARLEAEARLSIDTSNFNNNNNKSKNPNSISETDSSDYFLRIWNSAVGDAFRDIRKHDTDNNKYKTSCCQSPSSAVTAELASNNQLSNGVKEEFEWRNYKFCVEDMIHGSDSSSSNDLEDSPDTALQLLLDFPMNNDMSFLENSFDCPL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01532 303 MobiDBLite consensus disorder prediction 122 152 - -
Car03g01532 303 Gene3D - 11 68 - -
Car03g01532 303 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 298 - -
Car03g01532 303 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Car03g01532 303 CDD SANT 16 62 IPR001005 -
Car03g01532 303 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Car03g01532 303 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Car03g01532 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Car03g01532 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Car03g01532 303 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Car03g01532 303 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Car03g01532 303 CDD SANT 70 113 IPR001005 -
Car03g01532 303 PANTHER PROTEIN ODORANT1-LIKE 1 298 - -
Car03g01532 303 SMART sant 13 64 IPR001005 -
Car03g01532 303 SMART sant 67 115 IPR001005 -
Car03g01532 303 Gene3D - 70 117 - -
Car03g01532 303 MobiDBLite consensus disorder prediction 128 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01532 Car-Chr3 60874786 60876987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01532 1 300 MYB Transcription Factor Family AT3G61250 60.726 4.71e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car03g01532 Myb_DNA-binding 2.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01532 K09422 - gmx:100816569 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01532 03 60874786 60876987 Car03g01532 03 60874786 60876987 ECH
Car03g01532 03 60874786 60876987 Car07g02731 07 52496209 52499604 PCT