Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01524 ATGACCGTTTCGCTGTTTACGCTCTCTTCACTTCTTTCTTCTCAAGACCACCGCTCCAAAACCATCCTCACACCTTCCGGCAGCTTTCTTCCTTCTTTCTCAATCGTTAGGTCAGGTTCGGCAGCGTTTTCCGGTTTCTTCCTTCTTTCTCAATCGTATGGTGCTGGCATATTGACAGCCATGAGTAGTATTTCCAAGAAAGATGAAGGTGGGAAAATAGTCCAGCCTAGTCGGTCGTTAGAATCACCTGAGGATGATAATTGCAAAACGGTCAAGCTCAAGCGTAGTCGACCGTTTTCTCCAGAAGTAACTGTTAATGGAGGTAGTCAGCCATCAGTATCCGCAGAAGAAGCTGATAATGATAATAGAGATAACATCGAAGGAGGAGGAGATGGTAATTTAAAGAAGGGTTCATGGACACCTGCTGAGGATGCAATTTTGGTAGAATATGTTCAAAAGTACGGAGAGGGAAATTGGAGTGCGGTCCAAAAAATATTTGGACTTGCTCGTTGCGGAAAGAGCTGTCGCCTAAGATGGACAAATCATTTGAGGCCTGATCTGAGAAAGGATGCATTTACCGCAGAAGAAGAAAAGTTACTTATTGAACAACACTATTTATTAAGAAATAAATGGTCTCGAATTGCTCTGTCGTTGCCTGGGCGTACAGATAATGAGATAAAAAACTATTGGCACACAAGAGTAAAAAGAATGAAAAAAGCTGGCTTACCGATCTATCCTGAGGAAATAGTGCAAAGGGCGAACAACATGAATCAAGACCATTTAAATGACGATGTGGTAGCCAACCAAAATGATGATGATTCACAAAGAGAAAACTTCGAGATACCTGATGTGGTATTTAAAAGTTTCAAACTCTGTCCAGATGCAATTGTTCTACCACCACAGTTAAATATGCAAGGAAGTGGTTTGGTTGATCAAAACATAGACTCAATCTATAATATCTTGTTTGTGCCTCCCTCAAAGCGTGCTCGATTGGAAGATACAACATTCAATCGTCCAGACAATTATACCAGTAATGCTGCTGCTATTCCAGTGTTTGATAAGTGTGAAAATTACTGTATGTTGTCTCCTTCTCCCAGTGATTCTATTCTCGACAATAGCGATCAGTTTCATGAAGACGATGATAACCTTACTGTCGACAATCACGAACATGATGATAACCTTACTTTCGATCATCATGCATTAAACAATATCTCTTCTTCTGAACCCATATATGATGGGTGCATGAGAAATGAGCTCCCTTCATTCCAAAATTTAGAGACTCAACAATGTAGCTTGGACATGCCTGCGTCCCGATTTCCTTTGCATGAGTCTGTCGACGCATCGATTCAGTTTCCTCCGATCGAGGATTCTAATCAATCAATTCTTTATCCTGACAATCGTGGTCCACTCAATACAACAAGTTCATTCCACAACCATTCAAATGGCACAAACTTGCAAGAGGGAATGGAAAGAACCGCGTTGAATGAGGCATTCAAGAGCTCAACTTACAATGCATATGAGGAGTCTTCTGCTCAATTTATGTCTTCTGACTACAACAATAATCATATTAGCATGTTCTCAATGGCTGAGTCTTATTCTTATCCACTTGAAACTCCTGACGGTTATGGTGGTATTAATCAAAATGCCCAGTTCATAGATAATTCTTTCATTAACGGAGATTTGGATCAACTAAATTTGACACACCAAGATGCTTTGCCCGACTTCAATTCTCATTATATTATTCAAAATGCACAGTTAATAGATAATTCTTTCATGCACGGAGATTTGAATCAACTAAATTTCACGGCCCATTCTTCCATGGTAGGAAGTTTGAATCAAATAGATTTAGCCCACCATTTGTCCAACTTCAATGCTCCAGGTATTAATCAAAATACATTTAATCAGTTTACAGATGGATATCTGAATCAAGATTTGACGCAAGCAGATGACTTTAGTTGGTGTAGGTATATTAGTGAGCCAAATACTGAATATATTTGA 1998 0.3949 MTVSLFTLSSLLSSQDHRSKTILTPSGSFLPSFSIVRSGSAAFSGFFLLSQSYGAGILTAMSSISKKDEGGKIVQPSRSLESPEDDNCKTVKLKRSRPFSPEVTVNGGSQPSVSAEEADNDNRDNIEGGGDGNLKKGSWTPAEDAILVEYVQKYGEGNWSAVQKIFGLARCGKSCRLRWTNHLRPDLRKDAFTAEEEKLLIEQHYLLRNKWSRIALSLPGRTDNEIKNYWHTRVKRMKKAGLPIYPEEIVQRANNMNQDHLNDDVVANQNDDDSQRENFEIPDVVFKSFKLCPDAIVLPPQLNMQGSGLVDQNIDSIYNILFVPPSKRARLEDTTFNRPDNYTSNAAAIPVFDKCENYCMLSPSPSDSILDNSDQFHEDDDNLTVDNHEHDDNLTFDHHALNNISSSEPIYDGCMRNELPSFQNLETQQCSLDMPASRFPLHESVDASIQFPPIEDSNQSILYPDNRGPLNTTSSFHNHSNGTNLQEGMERTALNEAFKSSTYNAYEESSAQFMSSDYNNNHISMFSMAESYSYPLETPDGYGGINQNAQFIDNSFINGDLDQLNLTHQDALPDFNSHYIIQNAQLIDNSFMHGDLNQLNFTAHSSMVGSLNQIDLAHHLSNFNAPGINQNTFNQFTDGYLNQDLTQADDFSWCRYISEPNTEYI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01524 665 SMART sant 188 236 IPR001005 -
Car03g01524 665 SMART sant 135 185 IPR001005 -
Car03g01524 665 SUPERFAMILY Homeodomain-like 133 230 IPR009057 -
Car03g01524 665 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 117 563 - -
Car03g01524 665 ProSiteProfiles Myb-like domain profile. 184 234 IPR001005 -
Car03g01524 665 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 238 IPR017930 -
Car03g01524 665 Pfam Myb-like DNA-binding domain 139 200 - -
Car03g01524 665 CDD SANT 191 232 IPR001005 -
Car03g01524 665 CDD SANT 138 183 IPR001005 -
Car03g01524 665 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 117 563 - -
Car03g01524 665 MobiDBLite consensus disorder prediction 68 137 - -
Car03g01524 665 ProSiteProfiles Myb-like domain profile. 131 183 IPR001005 -
Car03g01524 665 Gene3D - 135 188 - -
Car03g01524 665 MobiDBLite consensus disorder prediction 102 116 - -
Car03g01524 665 Gene3D - 190 264 - -
Car03g01524 665 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 187 IPR017930 -
Car03g01524 665 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01524 Car-Chr3 60777089 60779535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01524 129 458 MYB Transcription Factor Family AT3G11440 36.592 5.62e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car03g01524 Myb_DNA-bind_6 4.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01524 K09422 - cam:101510675 1246.49