Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01512 ATGCAGAACGAAGACGGACAAATCACTGAGCTCTATATTCCCAGGAAGTGTTCTGCTACAAACAGATTGATAACTGCTAAGGATCACGCTTCCGTTCAAATCAACATTGGTCATTTGGATGAATCCGGTGTCTACAATGGTCACTTCACCACTTTTGCCCTCTGTGGCTATACTCGCGCACAGGGAGATGCTGACAGTGGACTTGATCGTTTGTGGCAGAAAAAGAAAACCGAAATTAAGCAGTAG 246 0.4472 MQNEDGQITELYIPRKCSATNRLITAKDHASVQINIGHLDESGVYNGHFTTFALCGYTRAQGDADSGLDRLWQKKKTEIKQ 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01512 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Car03g01512 81 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Car03g01512 81 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Car03g01512 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 - -
Car03g01512 81 Gene3D - 1 80 IPR038579 -
Car03g01512 81 PIRSF RPS21e 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01512 Car-Chr3 60691781 60693766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01512 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 82.716 2.80e-50 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01512 K02971 - qsu:111988471 157.918