Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01509 ATGGCGAACCCAGAAGCAAAGCTCGAAACTTTCTTGCATTGGCTACAGGCAAATGGGGTGGACCTCCGAGGTTGCAATATCAAGTACTGTGATTCCAGAAAAGGGTTTGGCATTTTCTCTGATAAAGATGTTTCTGATGGGGTTCTGTTGGTTGTTCCACTAGAGTTAGCAATTACTCCAATGAGAGTGTTGCAAGATCCGTTTCTAGGACCAGAATGTAGAGCATTGTTTGAAGAAGGAGATGTAGATGACAGGCTCTTAATGATGCTGTTATTGACTGTGGAGCGTTTGCGTAAGGATTCTCTATGGAAGCCGTACCTTGATATGCTTCCAACCACTTTTGGAAATACACTTTGGTTTAATGAAGAGGAACTTCAAGAGCTAAGAGGAACAGCGTTATATCGTGCGACTGAATTACAGAAGAAAAGCCTGGTGAATTTATATGAAACTAAAGTGAAGGATTTAGTGAAGAAACTTTTGACTCTTGATGGAGATTCAGAGACTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTTTGGAGCCGTGCTTTGAACATTCCAATGCCCCGTTCTCATGTATTTCCAGAAATGCAAGATGTTCATCAGAATTGCACTCCAAAAGCTGATGAAAAAGGAAGCCAGGTTACAAATCCTGACGATCTAACCGAGGAAACGACACATAACACAGAGCAAGGAGACACTGTTTGGGTTGAGGGTCTTGTCCCTGGCATTGACTTTTGCAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGCTTAACAACACGAGTTCCTGTATCAATGTATCTTCTTTCTGCTGCTCAAAGTCCCTTGCAGATTGGTCGAGAAATTTCCATTAGTTATGGCAACAAGGGAAATGAGGAACTTCTGTATCTGTATGGTTTTGTCATTGATGGTAACACAGATGACTACCTCATGGTCCATTATCCAGCAGAAGCAATAAATACTATTCCTTTTGCAGAGTCTAAAAGTCAGCTTCTTGAAGTGCAGAAAGCTGAAATGAGATGTCTTTTACCCAAAACTCTGCTGGATAATGGATTTTTTCCATTAGGCACCCAAAACAGTGGAGAAAATAACAAGTGCAACCGAGTTTGTAACTATAGTTGGAGTGGTCAACGCAAGATTCCATCTTATGTAAACAAGCTTGTTTTTCCTGAGAAATTTATGGCTACCTTGAGGGCCATAGCCATGCAAGAGGATGAGCTTTTCAAGGTTTCCTCAATGCTAGAAGAGCTTGCTGGTCCTGAAGGGGAAAGAGAGTTATCAGATATAGATGTCCAATCAGCAATATGGGAGGTTTGCGGTGATTCTGGCGCTTTACAAGTGCTAGTTGATCTTCTTCATGTCAAGCTAATGGATCTTGAAGAGCATTCTGGAACAGAGGAAAGTGACTTTGAATTGCTCAAGAAGGCTCTTATCATTGATAACCAGGAAGATAACAAACAGTATGCAATTAGAAATCTTCACTCTTGCAATTTACAACACAATTATCAAATTTGA 1542 0.4092 MANPEAKLETFLHWLQANGVDLRGCNIKYCDSRKGFGIFSDKDVSDGVLLVVPLELAITPMRVLQDPFLGPECRALFEEGDVDDRLLMMLLLTVERLRKDSLWKPYLDMLPTTFGNTLWFNEEELQELRGTALYRATELQKKSLVNLYETKVKDLVKKLLTLDGDSETEVCFEDFLWANSVFWSRALNIPMPRSHVFPEMQDVHQNCTPKADEKGSQVTNPDDLTEETTHNTEQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGLTTRVPVSMYLLSAAQSPLQIGREISISYGNKGNEELLYLYGFVIDGNTDDYLMVHYPAEAINTIPFAESKSQLLEVQKAEMRCLLPKTLLDNGFFPLGTQNSGENNKCNRVCNYSWSGQRKIPSYVNKLVFPEKFMATLRAIAMQEDELFKVSSMLEELAGPEGERELSDIDVQSAIWEVCGDSGALQVLVDLLHVKLMDLEEHSGTEESDFELLKKALIIDNQEDNKQYAIRNLHSCNLQHNYQI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01509 513 Pfam SET domain 35 296 IPR001214 GO:0005515
Car03g01509 513 PANTHER SET DOMAIN-CONTAINING PROTEIN 4 498 - -
Car03g01509 513 MobiDBLite consensus disorder prediction 216 230 - -
Car03g01509 513 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 498 - -
Car03g01509 513 Gene3D set domain protein methyltransferase, domain 1 5 310 - -
Car03g01509 513 SUPERFAMILY SET domain 7 314 IPR046341 -
Car03g01509 513 MobiDBLite consensus disorder prediction 207 232 - -
Car03g01509 513 CDD SET_LSMT 31 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01509 Car-Chr3 60652549 60658066 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car03g01509 SET 4.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01509 - - gmx:100777394 816.609