Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01503 ATGTTGGGTTCAAATACCAATTTAGTGACAACTGTTATTGGATTTGGCATGAGTGCCACTTTCATTGTTTTTGTTTGCACAAGAATTATTTGTGGAAGGCTTAGAGGAGGTGTTGAATCTAGGATGATGTATGAGATTGAATCAAGATTTGATATAGAACAGCCAGAACATCATGCTAATGCCCCTGAATCAATTCTGATTGAAGCAATCCCAACTTTGAAGTTCAATCAAGAGGCTTTCAGTTCCATTGAAGATACACAGTGTGTAATATGTTTGGCAGACTACAAAGAAAGAGAAGTCTTGCGGATCATGCCAAAATGCGGCCACACTTTTCATCTTTCATGCATTGATATATGGCTGAGGAAACAATCTACCTGTCCAGTGTGCCGTCTGCCGTTGAAAAACTCTTCCGAAACAAAACATGTGAGACCTGTGACATTCACCATGAGCCAACCTCTTGACGAGTCGCACGCATCCGATAGGAATGAAGATAATGAGAGGCGTGTCGAAACTACTTCAGTCAATTCCATACAGCCAACTTCTGAAGAATCAGAGGCAAGGCAATGA 567 0.4109 MLGSNTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRFDIEQPEHHANAPESILIEAIPTLKFNQEAFSSIEDTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQPLDESHASDRNEDNERRVETTSVNSIQPTSEESEARQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01503 188 MobiDBLite consensus disorder prediction 146 188 - -
Car03g01503 188 Pfam Ring finger domain 87 130 IPR001841 -
Car03g01503 188 MobiDBLite consensus disorder prediction 171 188 - -
Car03g01503 188 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Car03g01503 188 MobiDBLite consensus disorder prediction 156 170 - -
Car03g01503 188 PANTHER OS02G0676500 PROTEIN 1 171 - -
Car03g01503 188 CDD RING-H2_EL5_like 87 130 - -
Car03g01503 188 PANTHER OS11G0150450 PROTEIN 1 171 - -
Car03g01503 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 140 IPR013083 -
Car03g01503 188 SMART ring_2 88 129 IPR001841 -
Car03g01503 188 SUPERFAMILY RING/U-box 77 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01503 Car-Chr3 60605339 60607524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01503 68 133 C3H Transcription Factor Family AT4G10160 51.515 3.08e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01503 - - ccaj:109802319 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01503 03 60605339 60607524 Car03g01503 03 60605339 60607524 ECH