Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01502 ATGGTGGAAGATGTTGATTCACGTTCAACAGAAGATTGGTTGTTACATGCAAAGAAGCTTGTCCCTATTGCTCTTGATAAAGCAAAAGAGGTTAAAGGCTTTCTTTGTAGATGGAAAATGATAATTTCTAGATTAGAACATATCCCATCAATGTTATCAAATTTATCAAGCCATCCGTGTTTCTCAAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCGAATTCACTCGGCGAAGCGGTCAAATTGGCTGAATTGTGTGTGAAGGACAAGTATGAAGGTAAGCTTCAGATGCAGAGTGATCTCGATGCGTTAACCGGTAAACTTGATTTAAATTTAAGAGATTGTGGACTTTTGATCAAAACTGGTATGCTCGGCGAGGCTACTTTGCCATTAGCTGCGGCTGTGTCTGCGGCCGAGTCATGTTCTGTGGCAGAATCAGATGCTGCAGCACACAACAACATAAGGGAATTACTCGCGCGGCTTCAGATCGGTCACTTAGAAGCAAAGCATAAAGCTCTGGACAGTGTTGTTGAGGTTATGAAAGAAGATGAAAAGAATGTTTTGGCTGTTCTTACTAGGAGCAACATTGCTGCGTTGGTTCAATTGCTTACAGCAACATCAACAAGGATAAGAGAGAAAACAGTTACTGTCATATGCTCGCTGGCCGAATTGGGTAGTTGTGAGGATTGGCTAGTTTCTGAAGGAGTTTTACCGCCTCTTATAAGACTTGTTGAATCAGGCAGTGCTGTAGGTAAAGAAAAGGCTGCAATATCACTTCAGAGGCTATCGATGTCAGCTGAAACATCGCGTGAAATCGTTGGACATGGTGGTGTTTGTCCGCTTGTTGAGCTTTGTCGAACCGGTGATTCTGTTTCGCAGGCTGCTTCGGCGTGTACGTTGAAGAATATATCAGCTGTTCCAGAGGTGAGACAAGTTTTGGCTGAAGAAGGGATTGTGAAGGTAATGATCAATTTGTTAACCTGTGGAATGCTGTTAAATTCCAAAGAATATGCTGCAGAATGTTTGCAGAATCTCACCGCAAGCAATGAGAGTCTAAAAAAAAGTGTTGTATCAGAAGGTGGTGTTAGGAGTCTTTTGGTTTATCTTGATGGTCCACTTCCTCAAGAATCGGCTGTTGCGGCATTAAGGAATTTGGTTGGATCGGTTTCTGAGTCAACATTGGTTTCGTTAGGACTACTTCCTCGTTTGGTTCACGTGCTGAAATCTGGATCCATCGGAGCACAACAAGCCGCTGCATCAGCAATCTGCCGAGTTTGTAGCTCAACCGAGATGAAAAGATTGGTCGGCGAAGCCGGGTGCATTCCTCTCCTTGTTAAGATGCTTGAGGCTAAACAAAACAGTAGTAGAGAAGTTTCTGCACAAGCATTAGCAAGCTTGATGACTGTGTCTCAGAATAGAAGAGAAGTTAAGAAGGACGATAAAAGCGTGCCGAATTTAGTTCAGTTGCTTGATCCTAGTCCTCAAAACAATGCAAAGAAATATGCAGTTTGTTGCCTTGGATTGATTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCATATGGTGCTATTGGATATCTTAAGAAACTTACTGAGATGGATATTGCAGGAGCTAAAAAGCTACATGAGAGATTGGAAAGAGGGAAATTGAAAAGTTTGTTTAGCAAGAAATAG 1683 0.4207 MVEDVDSRSTEDWLLHAKKLVPIALDKAKEVKGFLCRWKMIISRLEHIPSMLSNLSSHPCFSKNALCKEQLQAVSNSLGEAVKLAELCVKDKYEGKLQMQSDLDALTGKLDLNLRDCGLLIKTGMLGEATLPLAAAVSAAESCSVAESDAAAHNNIRELLARLQIGHLEAKHKALDSVVEVMKEDEKNVLAVLTRSNIAALVQLLTATSTRIREKTVTVICSLAELGSCEDWLVSEGVLPPLIRLVESGSAVGKEKAAISLQRLSMSAETSREIVGHGGVCPLVELCRTGDSVSQAASACTLKNISAVPEVRQVLAEEGIVKVMINLLTCGMLLNSKEYAAECLQNLTASNESLKKSVVSEGGVRSLLVYLDGPLPQESAVAALRNLVGSVSESTLVSLGLLPRLVHVLKSGSIGAQQAAASAICRVCSSTEMKRLVGEAGCIPLLVKMLEAKQNSSREVSAQALASLMTVSQNRREVKKDDKSVPNLVQLLDPSPQNNAKKYAVCCLGLISSSKKCKKLMISYGAIGYLKKLTEMDIAGAKKLHERLERGKLKSLFSKK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01502 560 SMART arm_5 308 349 IPR000225 GO:0005515
Car03g01502 560 SMART arm_5 350 389 IPR000225 GO:0005515
Car03g01502 560 SMART arm_5 430 470 IPR000225 GO:0005515
Car03g01502 560 SMART arm_5 471 513 IPR000225 GO:0005515
Car03g01502 560 SMART arm_5 185 225 IPR000225 GO:0005515
Car03g01502 560 SMART arm_5 390 429 IPR000225 GO:0005515
Car03g01502 560 SMART arm_5 267 307 IPR000225 GO:0005515
Car03g01502 560 Gene3D - 375 457 IPR011989 -
Car03g01502 560 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 4 560 - -
Car03g01502 560 Gene3D - 146 374 IPR011989 -
Car03g01502 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 560 - -
Car03g01502 560 Gene3D - 458 543 IPR011989 -
Car03g01502 560 SUPERFAMILY ARM repeat 156 535 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01502 Car-Chr3 60576785 60580059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01502 206 479 U-box Gene Family AT3G54790 29.032 6.23e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01502 - - gmx:100789140 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01502 03 60576785 60580059 Car03g01502 03 60576785 60580059 ECH