Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01494 ATGAATATGATGAGAAGGTTGAAAAGCATTGCATCTGGGAGAACCTCTATTTCATCAGATCCTGGAGGGGATTCTACCACAAAAAGAGCCAAGTTTGATCAAGAGACTGAAAGAAAGGATAATGAGGAAACAAACCGTGTTGAGAGAGGTGGAAATATTCGGGAGAAGTATGTAGATGCATCACAAGAAGATACATCTGATACATTTAATTCTTCTAATGTTTCTATGGTGAATAAAACCGAGAAGTCAAGTTGTGATCAACTTCCAAAAGAATTGCACGAAATGAAAATTAAAGATGAGAAAAGCAAAAACAACAATGAAAAGGATATGGAGGCAACTATTGTGAACGGAAATGGAACAGAAACTGGTCAAATAATTACAACTTCTATTGGTGGTCGAGATGGACAACCAAAGAGGATAATCTCATACATGGCAGAACGTGTCGTTGGTACTGGTTCTTTTGGTGTTGTTTATCAGGCAAAGTGCATTGAAACTGGTGAAGCAGTTGCAATAAAGAAAGTCTTACAAGACAAGAGATATAAAAATAGAGAACTCCAGGTTATGCGTATGCTTGAACATACTAATGTTCTTAAACTAAAGCACTGTTTCTACTCGACGGCTGAGAAAGAAGATGTGTACCTTAACTTAGTTTTGGAGTATGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATGTCAGGATGCACCAACACATGCCTATAATTTATGTGCAACTATATACATATCAGATATGCCGCGGTTTAAATTATATGCACCATGTGGTTGGAGTTTGTCATCGTGACATCAAACCCCAGAATCTATTGGTTAATCCCCAGACTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAAATGTTGATGCCCGGTGAACCCAACATATCATACATATGCTCCCGATATTATAGAGCTCCTGAACTTATATTTGGTGCAACGGAATACACAACTGCCATCGATGTTTGGTCTGCTGGCTGTGTTTTGGCTGAGCTTCTTCTAGGACAGCCAATGTTTCCTGGAGAAAGTGGAGTTGATCAGTTGGTAGAGATCATTAAGGTCTTGGGAACACCAACTAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTTAAGTTTCCTCAGATTAAAGCTCACCCGTGGCACAAGATCTTTCACAAAAGGATGCCTCATGAGGCAGTGGATCTCGTGTCGAGGATGCTTCAGTATTCGCCAAATCTACGTTGCACTGCTTTGGATGCATGTGCACACTCCTTCTTTGATGATCTTCGAGACCCAAATGCACGCTTACCGAATGGACAAGCACTTCCGCCGTTGTTTGATTTCACAGCTCAAGAATTGGCAGGCACACCAGATGAGTTGCGTCGGCGTCTCATTCCCGAGCATGCAAGGAGTTGA 1419 0.4059 MNMMRRLKSIASGRTSISSDPGGDSTTKRAKFDQETERKDNEETNRVERGGNIREKYVDASQEDTSDTFNSSNVSMVNKTEKSSCDQLPKELHEMKIKDEKSKNNNEKDMEATIVNGNGTETGQIITTSIGGRDGQPKRIISYMAERVVGTGSFGVVYQAKCIETGEAVAIKKVLQDKRYKNRELQVMRMLEHTNVLKLKHCFYSTAEKEDVYLNLVLEYVPETVYRVSKHYVRMHQHMPIIYVQLYTYQICRGLNYMHHVVGVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLMPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPMFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPHEAVDLVSRMLQYSPNLRCTALDACAHSFFDDLRDPNARLPNGQALPPLFDFTAQELAGTPDELRRRLIPEHARS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01494 472 MobiDBLite consensus disorder prediction 63 83 - -
Car03g01494 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Car03g01494 472 ProSitePatterns Protein kinases ATP-binding region signature. 149 173 IPR017441 GO:0005524
Car03g01494 472 Pfam Protein kinase domain 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01494 472 CDD STKc_GSK3 141 430 IPR039192 -
Car03g01494 472 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 472 - -
Car03g01494 472 SMART serkin_6 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01494 472 MobiDBLite consensus disorder prediction 1 86 - -
Car03g01494 472 MobiDBLite consensus disorder prediction 9 25 - -
Car03g01494 472 Gene3D Phosphorylase Kinase; domain 1 128 222 - -
Car03g01494 472 Gene3D Transferase(Phosphotransferase) domain 1 223 471 - -
Car03g01494 472 PANTHER SHAGGY-LIKE KINASE 6 472 - -
Car03g01494 472 SUPERFAMILY Protein kinase-like (PK-like) 142 452 IPR011009 -
Car03g01494 472 ProSiteProfiles Protein kinase domain profile. 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01494 472 MobiDBLite consensus disorder prediction 26 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01494 Car-Chr3 60444002 60448645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01494 149 430 Core Cell Cycle Gene Families AT1G76540 35.932 7.71e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Car03g01494 Pkinase 1.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01494 K00924 - gmx:100786458 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01494 03 60444002 60448645 Car03g01494 03 60444002 60448645 ECH