Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01492 ATGAATAGTGGTGTTTTGGAAGATTCTTCTTCTGTTTTGGAGACTGATCCACTTTGGAGTTTTAGTTCTGAGAGTAATTATGATGTTGATTCATATCAGTTTCTGGATAATGATGAAAATAGTATCTTGAAGCACGTAGAGTCTGCGAATACCATGCTATCATTCATATGGTGGATGATTGGGTTTTACTGGGTAACTGTTGGTGGTCAGAGTTTGACAAGGGAATCACCTCGGCTTTACTGGCTCTGTATTACATTTCTTGCTTTCGACTTTGTGATTGTACTGATCTGTGCTGCTGTTGCATGTCTCGTTGGAATTGCTGTTTGCTGTTGTCTTCCTTGTATACTTGCTATTTTGTACGCAGTGGCAGATCAGGAAGGGGCAACCAAGGAAGAGATTGACCAGTTGCCAAAATATAAATTTAAGAAAGAAGGCGATGCCCAAGAATCATCCAGAGGAGTGATGACGGAATGTGACAGTGATACAGCTTCTGAGCATGTTATTGCCTCAGAAGATGCAGAATGCTGTATCTGCCTTTCTGCCTATGATGATGGGGCTGAACTTAGAGAACTTCCGTGTAACCACCATTTCCATTGCACATGCATTGACAAATGGCTTCTAATCAATGCTACCTGCCCTCTCTGCAAATTTAACATTTTGAACACTGATAACCTCCATGAAGAAGTTTGA 690 0.4101 MNSGVLEDSSSVLETDPLWSFSSESNYDVDSYQFLDNDENSILKHVESANTMLSFIWWMIGFYWVTVGGQSLTRESPRLYWLCITFLAFDFVIVLICAAVACLVGIAVCCCLPCILAILYAVADQEGATKEEIDQLPKYKFKKEGDAQESSRGVMTECDSDTASEHVIASEDAECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLINATCPLCKFNILNTDNLHEEV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01492 229 CDD RING-H2_RNF111_like 174 218 - -
Car03g01492 229 PANTHER TARGET OF ERK KINASE MPK-1 5 229 - -
Car03g01492 229 SUPERFAMILY RING/U-box 165 222 - -
Car03g01492 229 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 229 - -
Car03g01492 229 SMART ring_2 175 215 IPR001841 -
Car03g01492 229 Pfam Ring finger domain 174 216 IPR001841 -
Car03g01492 229 ProSiteProfiles Zinc finger RING-type profile. 175 216 IPR001841 -
Car03g01492 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 228 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01492 Car-Chr3 60435542 60437690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01492 36 223 C3H Transcription Factor Family AT1G68070 54.639 1.41e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01492 - - gmx:100795425 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01492 03 60435542 60437690 Car03g01492 03 60435542 60437690 ECH