Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01486 ATGGATAATAATTATGGTTCATCATCTTCtccataccgttatccaaacccatatatgtatccccctaaccccaatcctaaccctaaccctaaccctaatccaccatatccacctccaaattcagctccttatccatatccttaCTTTTCTTCACATTCCTTTAACTATTCTTATCCTAGatcaccaccatcatcatcatcatcCAATTTGGAATATTCATACcctcctcctcctcctcctcctcctcATCAATTAGTACCCCCTTCAGCCCCACCTTCTTATCCTTCTTATGCCTACCATGTTCCTCCAAGTACTCATAATATTCCTCCTCAGCCTTACCTTTCACACCATGCTAGTTTCCAACATGGATCATCATCTCAACGTTATTATTATCAACAAAGTGATCCTTATGCTTCTCATGAAGTCCGTCCCCCCGATGCACATTCGCGTCATAATAGCTTCTCTGGTCCTTACTGGCAAGACACCTCGAGTAGTTCCCCAGGTGGTGGTGGAGTATCGTTGCCACAAACTAGTGGTGATAATAATTCAAAGCCTTCTGTTTATCCACCTTTGGATGAGATAATGAGTAATGTTAGGTTGTCTGATAATAACCAACCAACAGCTCCTGCATCGCCTCCTGCTCCTGCAGTGCAGCCTTTTATGCATTCGGTTTCGGTACCAAAGATGCAACAGAAGAAGGAGGATTTTTATGGACATTCTAACAACTCTTTTTCAGGTTGGGGATCGTCTTACCCGAATCGGGTGGACTCTGGTAGATTTTCGAATTATTCTGGCGGCTCGTTTAATGACTCGATGTACAGTCAGAACTTGCAGGTCGTTCCGACGCAGAGCAAAGGGTCATTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACATTGGGTGATATGTTTGGTAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACTATGAATAAGAAGATTACAAGTGATCCTTATGTTTCAATTTCGGTATCAAATGCTGTAATTGGAAGGACTTTTGTCATTAGCAACAGTGAAAATCCTGTTTGGATGCAACACTTCTATGTTCCCGTCGCACATAATGCCGCTGAAGTGCACTTTGTTGTTAAAGACAGCGATATTGTGGGTTCACAGCTCATCGGTATTGTGGCAATTCCAGTGGAACAAATATACTCAGGGGCAAAAGTTGAAGGAACTTACTCTATCCTCAACAATAATGGGAAGCCTTGTAAGCAAGGGGCTGTACTGACCCTATCCATTCAGTACATCCCAATGGAGCAACTGAGCTTTTATCATCAAGGAGTTGGAGCAGGACCTGAATATATCGGTGTACCTGCCACTTATTTTCCTTTGAGGAAAGGTGGAGCCGTTACGCTATATCAAGATGCTCATGTTCCAGATGGAAGCCTCCCTAATGTGTTGCTTGACAATGGAATGTTTTATGTGCATGGAAAGTGTTGGCATGACATCTTTGATGCCATTAGTCAAGCTCGTCGCTTGATTTATATTACAGGATGGTCAGTGTGGCACAAAGTTAGGTTGGTAAGGGATGCCGGTTACGCGTCAGATTATACCTTGGGCGACCTTCTAAGGACAAAGTCACAGGAGGGTGTAAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGAAGTATTTTGGGTTATAGAACAGATGGGGTCATGGCAACTCATGATGAGGAAACTAGAAGATTTTTCAAGCACTCATCAGTGCATGTGCTGCTTTGTCCTCGCAGTGCTGGCAAAAGACATAGCTGGATCAAGCAAAGGGAAGTTGGAACTATATATACACATCATCAGAAAACTATAATTGTGGACGCCGATGCTGGAAATAACCGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTATGTGATGGGCGATATGATACTCCTTCACATCCTCTCTTTAAGACATTACAGACAATACATAAGGATGACTATCATAACCCCACTTTCACGGGTAACACTGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGACGGTCCAGCAGCTTATGATGTCTTAACTAACTTCGAGGAGCGCTGGTTAAAAGCTTCAAAACCACATGGGATAAAGAAATTGAAAATTTCATATGATGATGCTTTACTTAGGCTCGAAAGAATTCCAGATGTTATTGGCATTAATGACACTCCTAGTGGTGATGATGATCCTGAATCTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAGCTCTGTTAAGAGATTTCCAAAAGATCCAAGAGAGGCAACTGGCAAGAACCTTGTATGTGGAAAGAATATGCTGATCGACATGAGCATACATACCGCATATGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGGTCTTCTTACAATTGGAGTCAACATAAAGATCTTGGTGCTAATAATTTAATCCCAATGGAAATTGCTCTAAAGATTGCAGAAAAGATTAAAGCAAATGAGAGGTTTGCAGTGTACATCGTGATTCCAATGTGGCCAGAAGGTGTTCCAACAGGAGCTGCCACACAGAGGATTCTATTCTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGTAATCGAGAGGCCGTAAATATGTATGAAAATGTCAGTGTGTCAGGAAATCCTCCACCAGCAAATAGTCCACAAGCAGCTAGTAGAAATAGCAGACGGTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATAATTGGATCTGCCAACATTAACCAACGCTCGATGGAAGGAACAAGGGACAGTGAGATTGCTATGGGAGCATACCAACCTCATCATACATGGGCAAGAAAACAGTCTTGTCCACATGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACAACTGAAGACTGCTTCTTGCAACCCGAGAGCCTTGCATGTGTGCGAAGGGTTAGAGCAATAGGTGAAATCAATTGGAAACAATTTGCAGCAAATGATGTAACAGAGATGAGAGGGCATTTACTAAAATACCCTGCAGAAGTTGATCGAAAGGGGAAAGTCAGATCGCTTCCCGGTCATGAAGAGTTCCCTGATGTGGGAGGAAAAATTGTTGGATCTTTTCTTGCGATGAAGGAGAATCTCACCATTTGA 3327 0.3946 MDNNYGSSSSPYRYPNPYMYPPNPNPNPNPNPNPPYPPPNSAPYPYPYFSSHSFNYSYPRSPPSSSSSNLEYSYPPPPPPPPHQLVPPSAPPSYPSYAYHVPPSTHNIPPQPYLSHHASFQHGSSSQRYYYQQSDPYASHEVRPPDAHSRHNSFSGPYWQDTSSSSPGGGGVSLPQTSGDNNSKPSVYPPLDEIMSNVRLSDNNQPTAPASPPAPAVQPFMHSVSVPKMQQKKEDFYGHSNNSFSGWGSSYPNRVDSGRFSNYSGGSFNDSMYSQNLQVVPTQSKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNKKITSDPYVSISVSNAVIGRTFVISNSENPVWMQHFYVPVAHNAAEVHFVVKDSDIVGSQLIGIVAIPVEQIYSGAKVEGTYSILNNNGKPCKQGAVLTLSIQYIPMEQLSFYHQGVGAGPEYIGVPATYFPLRKGGAVTLYQDAHVPDGSLPNVLLDNGMFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLVRDAGYASDYTLGDLLRTKSQEGVRVLLLIWDDPTSRSILGYRTDGVMATHDEETRRFFKHSSVHVLLCPRSAGKRHSWIKQREVGTIYTHHQKTIIVDADAGNNRRKIVAFVGGLDLCDGRYDTPSHPLFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDTPSGDDDPESWHVQIFRSIDSSSVKRFPKDPREATGKNLVCGKNMLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAVNMYENVSVSGNPPPANSPQAASRNSRRFMIYVHSKGMIVDDEYVIIGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSCPHGQIHGYRMSLWAEHTGTTEDCFLQPESLACVRRVRAIGEINWKQFAANDVTEMRGHLLKYPAEVDRKGKVRSLPGHEEFPDVGGKIVGSFLAMKENLTI 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01486 1108 MobiDBLite consensus disorder prediction 58 191 - -
Car03g01486 1108 MobiDBLite consensus disorder prediction 72 98 - -
Car03g01486 1108 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 620 655 IPR001736 GO:0003824
Car03g01486 1108 Gene3D Endonuclease Chain A 500 734 - -
Car03g01486 1108 PANTHER PHOSPHOLIPASE D 192 1108 IPR015679 -
Car03g01486 1108 ProSiteProfiles C2 domain profile. 280 419 IPR000008 -
Car03g01486 1108 SMART C2_3c 296 418 IPR000008 -
Car03g01486 1108 MobiDBLite consensus disorder prediction 15 41 - -
Car03g01486 1108 Pfam Phospholipase D C terminal 1028 1098 IPR024632 -
Car03g01486 1108 SUPERFAMILY Phospholipase D/nuclease 489 720 - -
Car03g01486 1108 Pfam C2 domain 295 421 IPR000008 -
Car03g01486 1108 MobiDBLite consensus disorder prediction 153 185 - -
Car03g01486 1108 Gene3D C2 domain 290 434 IPR035892 -
Car03g01486 1108 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 954 981 IPR001736 GO:0003824
Car03g01486 1108 SUPERFAMILY Phospholipase D/nuclease 788 1040 - -
Car03g01486 1108 Pfam Phospholipase D Active site motif 955 981 IPR001736 GO:0003824
Car03g01486 1108 Pfam Phospholipase D Active site motif 621 655 IPR001736 GO:0003824
Car03g01486 1108 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 293 444 IPR035892 -
Car03g01486 1108 MobiDBLite consensus disorder prediction 1 41 - -
Car03g01486 1108 Gene3D Endonuclease Chain A 766 1004 - -
Car03g01486 1108 SMART pld_4 954 981 IPR001736 GO:0003824
Car03g01486 1108 SMART pld_4 620 655 IPR001736 GO:0003824
Car03g01486 1108 PANTHER PHOSPHOLIPASE D ALPHA 1 192 1108 - -
Car03g01486 1108 CDD C2_plant_PLD 290 442 - -
Car03g01486 1108 MobiDBLite consensus disorder prediction 110 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01486 Car-Chr3 60388190 60396285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01486 65 1108 Phospholipase D Gene Family (Wang group) AT2G42010 68.808 0.0 1461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01486 K01115 - gmx:100801286 1765.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01486 03 60388190 60396285 Car03g01486 03 60388190 60396285 ECH