Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01469 ATGGTTACCATCGGCGGCGAATCTCCTTGCACCTCACGAATGACGCCGTCTCAGGAAAAACGTCACCGTTCCATCTTCGAACTTCCGTCGAACTTCTTCGACTCTTGTCGTCTTCTCCCTTCTCCCCACTCCTCCGTTCCCGACCACTACAACGCTACTCTCCAAACCCTTCAACTACCCTCAAACGACGTCGATGATATTCAAAATTCAGTCGTTTCGGCTCCTAGGTTGACATGTAATACCTGCAAGGCTCAGTTCGATTCCCTTCAAGATCAACGCTCCCATTTCAAATCCGATATTCATCGATTCAATGTGAAGCTGACAATTGCTGGGAAAAGCATTGTGAAGGAAGATGATTTTGAGGTTCTGACATCTGATTTTGTCAAAGACTATGATGTGTCAAGTATATCTGGATCCGAAAGTGATGACGATGATGACAGTGAAAATGAGTCTCTTGGTCAAAATGTATTGCGTGGTAAATCCGGTGAAAGCTTTAAACAAAAGCTATTTGTCTGTCTTCAGACAGGGCAAAGAGTTTCTCTCTGGAAGTGTTTGATTATGAATGTGAGCGAAAATGTTTTGTATGAGGATGAACAAGTGCAGAAACATTTGGTTGAGAGGTTGAAATCTCTCACAGTTGAGCCTAGGGATAACACCCGTTTGAGGATTGTTCTGCTTGCATCCGGTGGGCACTTCGCGGGTTGTGTCTTTGATGGTGATACAGTTGTAGCTCACAAGACATTTCACAGATATGTTGTGAGGGCCAAGGCCGGAAAAAAGCAGTCATCTAAAGATGCTTCTGGTAGGGCTGCACATTCTGCTGGTGCTTCACTTCGTCGTTATAACGAACTTGCATTAAAGAAGGAAGTTCATGAACTGCTTACTATTTGGAGACCGTATTTTGACGCTTCTATTTGCATTTTTATACATGCACCTTCAAGTAGTCGTCAACTGCTTTACGATGGAGATAAGCCGTGTTTTACCAATCCGCAATGTGTTAGAAATATTGGGTTGGTTGTCCGCAGGCCTACTTTGAGGGAAGCAAAGCGTGTTTATAGCCAGTTGACCCTAGTATCCAATGAGGCAGATGAGAAGGAAATTTTACAAAGCAACCAACAGGACGTGGTGCCAAATTGCATTGCTAAAAGAAACGGCACCCCACCTGTCAACGAAGTGGACATGGCTGGGTTGGATGAAAATGATAAAGCTGAAGCTTGTTCAAGTAACCAAAATGATGAAGCTCTTATTTTGAGTAATGGCGAAAATGAAAATGAGCTGCCTGCTAAGTCAACTCCTTTACATGAAGCAGCACAATCTGGTGACTCTGAAAAGGTTATGGAACTCCTGGAACAAGGCTTGGATCCATGCATCAAAGATGAAAGGGGGCGGACCCCGTATATGTTGGCACCTGACAAAGATGTCAGGAACACTTTCAGAAGGTTTATGGCTTTAAATCTTGACAGATGGGATTGGCATGCTGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCGCAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGAGAAAAGCTAGAGCAAAAGAATTAAAGAAATTACGTAAAGCAAAAGAAAAGAAGGCCCAGGCTGAAAAAGAAACGACTGCACCAACATCTGCCACAGGACAATCTCAACCAAAAACTGGTGTGAAATTATCGAAAGAGGAGGAAATAAGAAGAGCACAGGATGCAGAAAGAGAAAAGAGAGCAGCTGCTGCAGAGAGAAGGATTGCTGCTCTGAAAATTCAAGCTAATAATAGTGCAACCACTTCAGAGGCTGAAAAAAATGGTGACATATACTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCATTCCACAGGTATAATTACAAATACTGCAGCACATCATGCATGCATGTACACAGAGAGATCCTTGAAGATGGATGA 1941 0.4317 MVTIGGESPCTSRMTPSQEKRHRSIFELPSNFFDSCRLLPSPHSSVPDHYNATLQTLQLPSNDVDDIQNSVVSAPRLTCNTCKAQFDSLQDQRSHFKSDIHRFNVKLTIAGKSIVKEDDFEVLTSDFVKDYDVSSISGSESDDDDDSENESLGQNVLRGKSGESFKQKLFVCLQTGQRVSLWKCLIMNVSENVLYEDEQVQKHLVERLKSLTVEPRDNTRLRIVLLASGGHFAGCVFDGDTVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRYNELALKKEVHELLTIWRPYFDASICIFIHAPSSSRQLLYDGDKPCFTNPQCVRNIGLVVRRPTLREAKRVYSQLTLVSNEADEKEILQSNQQDVVPNCIAKRNGTPPVNEVDMAGLDENDKAEACSSNQNDEALILSNGENENELPAKSTPLHEAAQSGDSEKVMELLEQGLDPCIKDERGRTPYMLAPDKDVRNTFRRFMALNLDRWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEKETTAPTSATGQSQPKTGVKLSKEEEIRRAQDAEREKRAAAAERRIAALKIQANNSATTSEAEKNGDIYCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHREILEDG 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01469 646 MobiDBLite consensus disorder prediction 507 521 - -
Car03g01469 646 MobiDBLite consensus disorder prediction 559 575 - -
Car03g01469 646 MobiDBLite consensus disorder prediction 542 558 - -
Car03g01469 646 MobiDBLite consensus disorder prediction 1 15 - -
Car03g01469 646 ProSiteProfiles Ankyrin repeat profile. 428 460 IPR002110 GO:0005515
Car03g01469 646 MobiDBLite consensus disorder prediction 502 575 - -
Car03g01469 646 SUPERFAMILY Ankyrin repeat 415 484 IPR036770 -
Car03g01469 646 MobiDBLite consensus disorder prediction 135 156 - -
Car03g01469 646 Coils Coil 504 543 - -
Car03g01469 646 Pfam Bacteroidetes VLRF1 release factor 223 359 IPR041175 -
Car03g01469 646 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
Car03g01469 646 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 14 642 - -
Car03g01469 646 MobiDBLite consensus disorder prediction 1 21 - -
Car03g01469 646 Coils Coil 563 583 - -
Car03g01469 646 Gene3D - 393 506 IPR036770 -
Car03g01469 646 Pfam Vms1-associating treble clef domain 609 641 IPR041540 -
Car03g01469 646 ProSiteProfiles Ankyrin repeat region circular profile. 428 460 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01469 20 598 C2H2 Transcription Factor Family AT1G01930 53.457 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01469 K26089 - gmx:100527709 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01469 03 60110917 60118609 Car03g01469 03 60110917 60118609 ECH