Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01460 ATGAGTCTAACCTCTAGTggcggcggcggcggcagcggcagcggTAGCCCTTGTGGAGCTTGCAAGTTTTTGAGGAGAAAGTGTGTTCAAGGTTGTATTTTTGCTCCATACTTTGATGCTGAGCATGGTACAACACACTTTGCGGCTGTTCACAAAGTGTTTGGGGCTAGTAATGTATCAAAACTTTTACTTGGAATTCCAATTAATAAAAGGCTTGATGCTGCAATCTCTCTTTGTTATGAAGCACAAACAAGGTTGAGAGATCCTGTCTATGGATGTGTTGGTCACATCTTTACCCTTCAACAACAGGTGATGAGTTTACAAGCTGAAATCAACTACTTACAAAGCCACCTTACTTCAACAGAGTTAACCCAACCACTACTTCTACCACCACCACAGGCGGCAACGGCACCAGCGGTGTTCTCGTTAGCTGACCTACCATCGGCCACCGCGGCAACTATGCCGGTCACCTATGACATGTCTACACTTTTTGATCCACTGGGCCAACCTTCCCTGCCCATGCAACAACAGAGGCCCAATATTGACCCACGTCAATATTTAGCTGCTCATGGCCCAACATCAACCACTAATGCTGGACAACATGGGTCTTCCTCTGTGCCATCCTCCGATGCTTCATCATCTCTTTCGCTTTCCAAATTTTCCAAATGA 669 0.4335 MSLTSSGGGGGSGSGSPCGACKFLRRKCVQGCIFAPYFDAEHGTTHFAAVHKVFGASNVSKLLLGIPINKRLDAAISLCYEAQTRLRDPVYGCVGHIFTLQQQVMSLQAEINYLQSHLTSTELTQPLLLPPPQAATAPAVFSLADLPSATAATMPVTYDMSTLFDPLGQPSLPMQQQRPNIDPRQYLAAHGPTSTTNAGQHGSSSVPSSDASSSLSLSKFSK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01460 222 MobiDBLite consensus disorder prediction 168 222 - -
Car03g01460 222 MobiDBLite consensus disorder prediction 189 222 - -
Car03g01460 222 Pfam Lateral organ boundaries (LOB) domain 17 115 IPR004883 -
Car03g01460 222 MobiDBLite consensus disorder prediction 168 182 - -
Car03g01460 222 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Car03g01460 222 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 194 - -
Car03g01460 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 5 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01460 Car-Chr3 60029435 60033788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01460 20 186 AS2 family AT2G45420 59.195 7.82e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car03g01460 LOB 2.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01460 K21994 - gmx:100777737 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01460 03 60029435 60033788 Car07g02620 07 50271888 50276770 PCT