Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01459 aTGGAATTTGAATGTGGTAGAAGTGGTGGACCTTGTGGTGCGTGCAAGTTTCTGAGAAGAAAGTGTGTGAAAGATAGTTGCATATTTGCACCCTATTTTGAGTCATCAGTTGAAGGAACTGCTCATTTTGCTGCTATTCACAAAGTGTTTGGTGCAAGCAATGCATCTAAGCTACTCATGCAAATTCCACTTCATAAACGTCTTGATGCTGTTCTTTCTCTCTGTTATGAGGCTCTTGCTAGGGTTACTGACCCTGTTTATGGCTGTGTTGCTCATATCTTCGCTCTTCAACAACAGGTTGTGAAGTTGCAAGCAGAGTTAGCCCATGCACAAGCTCGTCTTTCCATATTGAAACGCATCTCTATAGATCCTCAATTTCAACACCCTCAAAGCTCTTCATTATCTCCAAATCAACATTCCTCTTTATTAGATCATCGCCATCATCATGTGTCATCAAACAATGAAATTAATGATTACATGTCCATGCACTTTGATAATCATCATCCAACACCTTTTGATATAACCAACTTGCTCAATCCATCATCCTAG 549 0.3989 MEFECGRSGGPCGACKFLRRKCVKDSCIFAPYFESSVEGTAHFAAIHKVFGASNASKLLMQIPLHKRLDAVLSLCYEALARVTDPVYGCVAHIFALQQQVVKLQAELAHAQARLSILKRISIDPQFQHPQSSSLSPNQHSSLLDHRHHHVSSNNEINDYMSMHFDNHHPTPFDITNLLNPSS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01459 182 ProSiteProfiles LOB domain profile. 10 114 IPR004883 -
Car03g01459 182 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 166 - -
Car03g01459 182 Coils Coil 93 120 - -
Car03g01459 182 Pfam Lateral organ boundaries (LOB) domain 11 111 IPR004883 -
Car03g01459 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 5 166 - -
Car03g01459 182 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01459 Car-Chr3 60009545 60011463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01459 9 120 AS2 family AT4G00210 74.107 1.50e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car03g01459 LOB 2.2e-34 No_clan