Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01457 ATGGAAGGAAGAGAAGGTATCAACACTGGTGTTACAGTTGTTGGAGCAGAAGCTCCATCATCTTATCATATGTCACCAAGGAGTGAAGCTCCAAGCCAACATGGTTCTGTTTCTGAACCAGGAGGTGTGTCAGTTATCGGTGTTTCGCCAGTGAGTGTTGGAATTGATGGAGGACCAATTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGACCGGATGGGTCGGTAACTGCTGTGGCATTGTCGCCATTGCCAATCTCATCTTCAGCTCCTTTTACTAATGAGTTTTCAACGGTGAAGCGGGGGAAACTGCATGGGAATATGGAGTACAAGCCGTCGAAAAATGTTGGTGTTGATCCTTTAGGTGACTCTGTTGGTACTAACTTTATGCCTCATATTATTACAGTCAACGCTGGCGAGGACATTACAATGAAGGTTATATCTTTTTCACAACAAGGACCGCGAGGCATATGCATCCTATCTGCTAGTGGTGTGATTTCAAATGTTACGCTTCGTCAGCCTGATTCTTCCGGCGGAACTTTGACCTATGAGGGCCGGTTTGAGATACTTTCGCTCTCCGGATCATTCATGCCTACCGAGAGTCAAGGAACAAGAAGCCGGTCTGGTGGAATGAGTGTTTCTTTGTCAAGCCCCGACGGTCGTGTTGTAGGCGGTGGAGTTGCCGGTCTTCTTGTAGCTGCCAGTCCTGTGCAGGTGGTTGTTGGAAGCTTTCTTCCAAGTAACCAGCAAGAGCAGAAATCAAAGAAGCCAAAATCCGATTATCCGCCAGTTACTGTTACCTCACCTATTGCGGTGTCTTTGGCACCACCCCCTACCAACGGTGAAAGGGTGGATGTCATGCATGGACATGTACTGCAAAATTCCGGAACAATTAACTCAAACCTTAATCCTCCCTCAGCCTTTCGTAGAGAAAACTGGGTTAACATGCACTCCATGCCGGACTCGATGAAGGCCGCAACTGATATTAACATATCTTTGCCTGATAACTAA 1011 0.4679 MEGREGINTGVTVVGAEAPSSYHMSPRSEAPSQHGSVSEPGGVSVIGVSPVSVGIDGGPIKKKRGRPRKYGPDGSVTAVALSPLPISSSAPFTNEFSTVKRGKLHGNMEYKPSKNVGVDPLGDSVGTNFMPHIITVNAGEDITMKVISFSQQGPRGICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTESQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNQQEQKSKKPKSDYPPVTVTSPIAVSLAPPPTNGERVDVMHGHVLQNSGTINSNLNPPSAFRRENWVNMHSMPDSMKAATDINISLPDN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01457 336 Gene3D - 131 267 - -
Car03g01457 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 129 250 - -
Car03g01457 336 MobiDBLite consensus disorder prediction 25 39 - -
Car03g01457 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 244 IPR005175 -
Car03g01457 336 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 335 - -
Car03g01457 336 MobiDBLite consensus disorder prediction 1 43 - -
Car03g01457 336 ProSiteProfiles PPC domain profile profile. 126 267 IPR005175 -
Car03g01457 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 335 IPR039605 GO:0003680
Car03g01457 336 CDD DUF296 131 221 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01457 Car-Chr3 59987171 59991120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01457 6 275 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.096 2.31e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01457 - - gmx:100777213 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01457 03 59987171 59991120 Car07g02615 07 50085028 50090071 PCT