Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01450 ATGGCTACTTGTGCTTTATTCAATGGTGTTAGATGCAACAATAGTACTACCGAAGAAAGcaacaacaacaacaacaaTAGTGCCTCTAACTCCAGCAACCTCAGCAGTGAAGAATTACACACTCTACAACACAACAACATGCTTCCTCATTCTGAAAGAAAAATTCTCAGAAAAAGATTGGCTTCAGAAATGGAACCTCAAATTCAAGTTCATACCCCCCAACCACACCCCCACAATTCTTCTTCAACAACAACAGATAATAATAACTATCATAGATTTTCTCGTCGAACCAACACTTCCTCATGTTTACCTGCATCCacacaaaaaggggtctcaacaacaacaacaactactttagctgcaggtactaataataataataataataatactaataactatcattatcataataataacaatattaacactaataataataatattattagtcaaaatagcaatgctttgacatcatcacgagataacaatgttgttggtatacaaaacTACCCCACAGTGACACTCACAACCAACTACTCCACTATGTTGTTACCTTCTTCCAATCTCAACAATTTCcaactagaacaacaacagcaacagcaacaacacaaTCCTCTTCCTTCTATCTGTGGTTTCTCTGGTTTACCACTTTTTCCATCTCAAAACCAAACAAACAACACTGCCAATAATATTGTTGATGTTGTTAATTCTTCATCTTCTTCTTCAATGGAAGAAACTTCAGCTACAACTACTTGGATTGATGGTATTCTAAAGGATCTTATTCACAGTTCTAACAGTGTTTCGATTCCTCAACTCATCAACAATGTTAGAGAGATTATATATCCTTGTAATCCAAACCTTGCTCTTGTTCTTGAACATAGGCTTCGTCTTCTCACAGAAACTACACCACCCAAAAACACAGAAAGACTTGTTCTTCCTCCTAATAATGTTTCAACAATGAAACACATGAACCCTGTTGATACCATTGTTCCAAGTTTGCATTTTTCTGATTCTTCACCCATTTTTCCCAATTGGGTTGTTCCTCAAATAACAAACACACTTCAAGAAACTTCCAACAACAACAATAACCCTTTGGTTACTTTACCTTCACAACCATCAACACAACAAGATCAAGAGGaacaacaacaacaacaacaacaacaaATTCAAGATCTTGCTGCAGCACCTACTGCTGCTGATTTAGCACaaacaagaaagaagaaagaggaaatgaaagaacagaagaagaaagatgaaGAGGGTTTACACCTTCTAACGCTACTTCTCCAATGTGCAGAAGCTGTATCAGCTGAAAATCTAGAAGATGCAAACAAGATGTTACTTGAGATTTCACAGCTCTCAACACCATTTGGAACATCAGCACAAAGAGTAGCAGCTTATTTCTCAGAAGCAATTTCAGCAAGACTAGTGAGTTCATGTTTAGGTATCTATGCAACACTTCCAAACACACCACACAGTCAAAAAGTTGCTTCAGCTTTTCAAGTCTTCAATGGTATAAGCCCTTTTGTGAAATTCTCTCATTTCACTGCTAACCAAGCTATACAAGAAGCATTTGACAGAGAAGACAGAGTTCACATCATAGATCTTGATATAATGCAAGGTTTACAATGGCCTGGTCTTTTTCATATTCTTGCTTCAAGACCAGGTGGACCTCCTTATGTGAGACTCACTGGATTAGGAACTTCTATGGAAACACTTGAAGCTACTGGTAAACGTTTGTCTGATTTTGCTTGTAAACTTGGTCTTCCTTTTGAGTTCTTTCCTGTTGCTGAAAAAGTTGGAAATGTTGATCCTGATAAGCTTAATGTTAGTAAATCAGAAGCTGTTGCTGTTCATTGGTTGCAACATTCTTTATATGATGTTACTGGTTCAGATACAAACACTTTGTGGCTCTTGCAAAGGTTGGCACCTAAAGTGGTAACGGTAGTGGAACAAGACTTAAGCAATGCAGGTTCATTTTTAGGAAGGTTTGTGGAAGCAATACATTACTATTCAGCACTATTTGATTCACTTGGTTGTAGCTATGGTGAAGAGAGTGAAGAGAGACATGTTGTTGAACAGCAACTATTATCAAGAGAGATTCGTAATGTACTTGCTGTTAGAGGACCATCAAGGAGTGGTGAGATAAAGTTTCATAATTGGAGAGAAAAACTTCAACAGTGTGGTTTTAGAGGCATTTCTTTGGCTGGTAATGCTGCTACACAAGCTAGTCTTTTACTTGGTATGTTCCCTTCTGAAGGGTATACTTTGGTTGAGGATAATGGTATCCTTAAACTTGGTTGGAAAGATCTTTGTTTGCTTACTGCTTCAGCTTGGAGACCTCCCTTTCATACCAACAATGCCATTCCACTTCATAACTAA 2385 0.3333 MATCALFNGVRCNNSTTEESNNNNNNSASNSSNLSSEELHTLQHNNMLPHSERKILRKRLASEMEPQIQVHTPQPHPHNSSSTTTDNNNYHRFSRRTNTSSCLPASTQKGVSTTTTTTLAAGTNNNNNNNTNNYHYHNNNNINTNNNNIISQNSNALTSSRDNNVVGIQNYPTVTLTTNYSTMLLPSSNLNNFQLEQQQQQQQHNPLPSICGFSGLPLFPSQNQTNNTANNIVDVVNSSSSSSMEETSATTTWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNPNLALVLEHRLRLLTETTPPKNTERLVLPPNNVSTMKHMNPVDTIVPSLHFSDSSPIFPNWVVPQITNTLQETSNNNNNPLVTLPSQPSTQQDQEEQQQQQQQQIQDLAAAPTAADLAQTRKKKEEMKEQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPNTPHSQKVASAFQVFNGISPFVKFSHFTANQAIQEAFDREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFACKLGLPFEFFPVAEKVGNVDPDKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGCSYGEESEERHVVEQQLLSREIRNVLAVRGPSRSGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHTNNAIPLHN 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01450 794 MobiDBLite consensus disorder prediction 12 38 - -
Car03g01450 794 PANTHER PROTEIN SCARECROW 179 783 - -
Car03g01450 794 MobiDBLite consensus disorder prediction 356 418 - -
Car03g01450 794 Pfam GRAS domain family 426 781 IPR005202 -
Car03g01450 794 ProSiteProfiles GRAS family profile. 416 781 IPR005202 -
Car03g01450 794 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 179 783 IPR005202 -
Car03g01450 794 MobiDBLite consensus disorder prediction 403 418 - -
Car03g01450 794 MobiDBLite consensus disorder prediction 68 113 - -
Car03g01450 794 Coils Coil 376 396 - -
Car03g01450 794 Coils Coil 399 422 - -
Car03g01450 794 MobiDBLite consensus disorder prediction 356 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01450 Car-Chr3 59811580 59815107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01450 203 782 GRAS Transcription Factor Family AT3G54220 65.247 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car03g01450 GRAS 8.1e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01450 - - gmx:100803919 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02504 06 28906984 28909327 Car03g01450 03 59811580 59815107 PCT