Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01446 ATGGACAAGAATAGCATCGATGATGTTGTCCTTGTAGGTGGCTCTTCTCGGATTCCCAAAGTGCAACAGCTATTGCAGGACTTCTTTAAGGGAAAAGATCTTTGCAAGAGCATCAACCCCGATGAAGCTGTTGCTTTTGGTGCCGCTGTGCAGGCTGCTCTGTTGAGTGAAGACATGAAGAATGTTCCAAACTTGGTTTTGATCGATGTTACACCGTTGTCTTTAGGCTGGAGGCTAGTACAAGATTGCATGGCTGTAGTGATTCCTAGGAATACTACTATACCTATCAAGAAGGCAGAGAATTTTGTTACAGTAGATGATAACCAGTCCTCTGTCTTGATCAGGGTTTATGAGGGTGAGAGAACTAGAGCCAGTGATAACAATCTACTTGGTTCTTTTACTCTATCCGGGTTGCCCCTTGCGCCTCGTGGTTATCCGTTCAACGTATGTTTTTCTATCGATGAAAACGGTATTTTGACAGTTTCTGCTGAGGAAGTATCCACTGGTAATAAGAATGAGATTATGATAACCAATTACAGAGAAAGGTTATCAGCGGATGAAATTCAAATTTTGATTCGAGAAGCTGAGGATTACCGTGCCGAAGATGAGAAATTCCTAAAGATGGCGAAAGTAAAGAATGCATTGGATGACTGTGTTTACAAAATTAAAACTGCTTTAAAAAAACAGAATATTAACTCGATGCTCTCCACACAAGATAACAAGAAGATCAATGATGCAATTACAAGGGCCAAAAATTTGCTTGATGAGAATCACCAACACGAAATAGATGTTCTTGAGGATCATTTAGAGGAGCTCAAAAtgcctagaatgagaggtgcgtttggccaaattattcgcaacttagatgatagaggtgatggtgcagagagaattccaccaacagtatcaaacaaacgacgcaacgaagcaaatcgtccgattaagcagcgtcgtcgaagacaagaggtccaggatgatgacgttgagcctactgagcatgcacaaatggaggaggatgtccctgggcctccacagatggagcaggcggctgaggaacagtatgctgcacatgctgccgatactgatgatgctgatgatattcatgatgcttctgcacatactgataatgctgatgagaaggatcagcagaccggatttcctggaggaccgacagtgacacatgtgttgacacaatatgagcatcacgtggctcggaggctatgggaaggacaggatcgtggatcattaaaagttattactcatggattgaagctgaagaagtttgccgaagttcctgtgccagatcctgtagagcattggattcggaactgtccacgacactcgacagttgggaggttacatgacgctactacagtgctggatttacgagcacttccctag 1401 0.2363 MDKNSIDDVVLVGGSSRIPKVQQLLQDFFKGKDLCKSINPDEAVAFGAAVQAALLSEDMKNVPNLVLIDVTPLSLGWRLVQDCMAVVIPRNTTIPIKKAENFVTVDDNQSSVLIRVYEGERTRASDNNLLGSFTLSGLPLAPRGYPFNVCFSIDENGILTVSAEEVSTGNKNEIMITNYRERLSADEIQILIREAEDYRAEDEKFLKMAKVKNALDDCVYKIKTALKKQNINSMLSTQDNKKINDAITRAKNLLDENHQHEIDVLEDHLEELKMPRMRGAFGQIIRNLDDRGDGAERIPPTVSNKRRNEANRPIKQRRRRQEVQDDDVEPTEHAQMEEDVPGPPQMEQAAEEQYAAHAADTDDADDIHDASAHTDNADEKDQQTGFPGGPTVTHVLTQYEHHVARRLWEGQDRGSLKVITHGLKLKKFAEVPVPDPVEHWIRNCPRHSTVGRLHDATTVLDLRALP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01446 466 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 61 216 IPR029047 -
Car03g01446 466 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 273 - -
Car03g01446 466 PANTHER HEAT SHOCK PROTEIN 70KDA 1 273 IPR013126 GO:0005524|GO:0140662
Car03g01446 466 Gene3D - 1 38 - -
Car03g01446 466 Gene3D - 39 53 - -
Car03g01446 466 PRINTS 70kDa heat shock protein signature 38 58 - -
Car03g01446 466 PRINTS 70kDa heat shock protein signature 6 22 - -
Car03g01446 466 PRINTS 70kDa heat shock protein signature 144 160 - -
Car03g01446 466 PRINTS 70kDa heat shock protein signature 64 83 - -
Car03g01446 466 SUPERFAMILY Actin-like ATPase domain 2 56 IPR043129 -
Car03g01446 466 Pfam Hsp70 protein 2 273 IPR013126 GO:0005524|GO:0140662
Car03g01446 466 MobiDBLite consensus disorder prediction 290 389 - -
Car03g01446 466 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 60 211 IPR029047 -
Car03g01446 466 MobiDBLite consensus disorder prediction 356 380 - -
Car03g01446 466 MobiDBLite consensus disorder prediction 315 336 - -
Car03g01446 466 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 211 273 IPR029048 -
Car03g01446 466 ProSitePatterns Heat shock hsp70 proteins family signature 3. 9 23 IPR018181 -
Car03g01446 466 Gene3D - 212 337 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01446 Car-Chr3 59745533 59748527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01446 1 273 Calmodulin-binding Proteins AT3G12580 59.636 5.46e-101 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01446 K03283 - gmx:102667578 347.821