Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01437 ATGGCTGCAAATTATGAGAATATCTTGTCACTGTCATTGAGGTCTACTTCAGAGGTTTACGGGGGAAATGATTCTCCCCGGGTTGGAGTATGTTCTCTTTGCCACAAGGCCTTATCGTCTGATGATGAGATAACAGGTGATCTTGCAACTGGTGGTGTATGTGGTGATTGTAAATTTCTATTGCTTGAAGACTTTATACCAAGCACTCGAAGGAGGCTTAGAGGTAGACTCAGACACAGTAGTTTTGAATCGGTTGATAATATTTTATCACAACATGCTGGACAAAACCATTCTTCTGCATCTGTAGAGGAAGATCAACTTGTAGATGGTGACAACTCTGCATGGTCATTGCAGTATGCTAGTGCAAATACTACTCCTAGTGGGTCTAGAAGCTGGAGGCAGGTTCTCTCGGATACCGACAGTGATGGTTTTGATAGTTGGTGCTCTCTTTATGGTGATAATGAATCGAGTTCGAGTTTTAGACAGTATATGGGTCCCCACAGTGAGACTGATTCTTTATCTTTTAGTGTTTACGGAGGTGACTCGGATATCTCGATGGATAGACACAGTTTTGTAGGCATTGGAACTTTTAATTTACCTGATGAGGGAGATGAGTTTGATAGTGACACTGACATAGATCCAATGCATGCTGGCCTCGGTCAATGGAACTCGGATgaagatgaggaggatgaggaagaggaagaggagggggagggggagggagaaagggaatgggaCCTACCCGAGGTTGACGAAGCTGAAGCTGCTCGTCTTCATATTCTTTTAACCTCAAGTCCAAGTGAGAGCAGGAGCCTAATTAATTGGGAACAAAGGATTAATGCTACTGAGTCCGAGGGAATATTTAGTCAAATAATCAGGGAAACTTGGTTAGCTTTGGACGATGCTGAATTACCTCATGGAGCTAACTTTGGAGATTTCCTCGATACTAGACGCTTCGATGATCTGTTCGAGAGTTTTGCTGAAAATGACAGCTCAAGACGAGGAGCACCTCCTGCTGCTGCATCGTTTGTAAATAATCTGCCTCGTGTAGTCATTAGCGAGGAACACAAGAATCACGACGAACTAGTTTGTGCCATCTGCAAGGATGTTTTGGCCCTTGGCACCAAAGTAAACCAGCTTCCTTGTTCTCACCTTTACCATTCTCATTGCATTTTGCCATGGCTGAAGACACGTAATTCATGCCCTCTTTGTCGGTATGAGCTTCCAACCGATGATAAGGATTATGAAGAGGGAAAACAGAACAATGATGGTAGAAATGTGATCATTGAGAGACAGCAACTACTTGTGATCGACGATAGCTTCTCTGATGTTTCTGAAGTGTTTGAAGATGATGTTACCGCTACTCATGATACCTCGAATTCTTCTGTGGTAAGAGGCGGTAGAGGAAGATGGTTGTTTCTTGCTGCAGCTCCAATTGTTAGTCTTGTCGGCATGGTTATCGTACTATGGTTAGGTAGTAACTCTCAGATTGAAGGGACCAGACATTCGAGCACTCGCTATTTATCCATGCAAAATCAGCAAGGTGTTCACGATTATGGTTCTCAGAACTCAAGGGAGAACAGAAGCAGAAGATGGTGGTGTCCATTCTAA 1611 0.4153 MAANYENILSLSLRSTSEVYGGNDSPRVGVCSLCHKALSSDDEITGDLATGGVCGDCKFLLLEDFIPSTRRRLRGRLRHSSFESVDNILSQHAGQNHSSASVEEDQLVDGDNSAWSLQYASANTTPSGSRSWRQVLSDTDSDGFDSWCSLYGDNESSSSFRQYMGPHSETDSLSFSVYGGDSDISMDRHSFVGIGTFNLPDEGDEFDSDTDIDPMHAGLGQWNSDEDEEDEEEEEEGEGEGEREWDLPEVDEAEAARLHILLTSSPSESRSLINWEQRINATESEGIFSQIIRETWLALDDAELPHGANFGDFLDTRRFDDLFESFAENDSSRRGAPPAAASFVNNLPRVVISEEHKNHDELVCAICKDVLALGTKVNQLPCSHLYHSHCILPWLKTRNSCPLCRYELPTDDKDYEEGKQNNDGRNVIIERQQLLVIDDSFSDVSEVFEDDVTATHDTSNSSVVRGGRGRWLFLAAAPIVSLVGMVIVLWLGSNSQIEGTRHSSTRYLSMQNQQGVHDYGSQNSRENRSRRWWCPF 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01437 536 MobiDBLite consensus disorder prediction 224 247 - -
Car03g01437 536 PANTHER OS06G0101300 PROTEIN 304 425 - -
Car03g01437 536 SMART ring_2 364 404 IPR001841 -
Car03g01437 536 MobiDBLite consensus disorder prediction 202 247 - -
Car03g01437 536 CDD RING-H2_RNF126_like 364 405 - -
Car03g01437 536 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 325 411 IPR013083 -
Car03g01437 536 Pfam Ring finger domain 364 405 IPR001841 -
Car03g01437 536 SUPERFAMILY RING/U-box 345 411 - -
Car03g01437 536 ProSiteProfiles Zinc finger RING-type profile. 364 405 IPR001841 -
Car03g01437 536 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 304 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01437 Car-Chr3 59678177 59680911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01437 30 536 C3H Transcription Factor Family AT5G01980 42.565 2.46e-108 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01437 - - mtr:MTR_7g074170 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01437 03 59678177 59680911 Car03g01437 03 59678177 59680911 ECH