Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01427 ATGTGGACTCTAGGAGTTCATGGATATGCCTTGGCTGTTTCATTTTGTTTCATCATCCTCATGGTAGCTTCACAAAGAACAGATCCTTCAGAAGTAATAGCACTGAAAGACATAAAAATGAGTTTGATTGATCCCATGGACAAACTGAGGAACTGGAATAAGGGTGATCCATGTGCAAGAAACTGGACTGGAGTTTGGTGTTTTGATAAAAAGGGTGATGATGGTTACTTCCATATCCGCGAACTCTACTTGATGGCTATGAATCTCTCGGGAACTCTAGTACCTCAGCTTGGTCTGCTCTCCCATCTTGAGATAATGGACTTTATGTGGAACAATCTGACAGGAACAATACCAAAGGAGATTGGAAACATTACATCATTGAGACTCTTGCTTTTAACTGGAAATAAATTAGCTGGTAGTTTACCGGAAGAGCTCGGCAACCTTTCAAATTTGAATAGACTCCAACTGGATGAAAACCAATTGTCAGGTCCTGTGCCAGAATCATTTGCCAACTTGGTCAATGTTAGACACCTCCACATGAACAACAACTCATTCAATGGTCAACTTCCGTCCAAACTTTCAAACCTATCCAATCTTCTGCATTTGCTTTTGGACAACAATAACTTATCTGGCTATCTTCCACCAGAATTCTCCAAGTTACATAGTTTGGCAATACTCCAGCTTGATAACAATAATTTCAGCGGGAATGGAATTCCTTCTACCTATGAAACTTTACCCAGGCTAGTAAAACTGAGTCTAAGAAATTGCAGTCTGCAAGGAGCTATTCCTGATTTCAGTTCAATACCAAGACTTAAGTATTTGGATCTTAGCTGGAATCAGTTCACGGGACCTATACCATCAAATAAACTTGCAGACAATATGACAACTATTGACCTGTCACATAACAAGCTCAATGGATCAATTCCTCGAGGCTTAGTATATCCTCATCTTCAAAGATTGGAACTAGAGAACAATTTACTGTCTGGGTCCGTCCGTGCTACCATATGGCAGAACATATCCTTCAGCAGAAAGGCTAAACTTATAATTAATCTTTATAACAACTTATTTTCTGGCATTTTGGGAGATCTGAATCCCCCAGCAAATGTTACCTTAAGGCTTTCTGGCAATCCTGTTTGCAAGAATTCCAACATACAAAGAATTGGTCAATATTGTGCACTTGAAAGAGATGAACTAGATGAAGAATTTGCAAATTCAACCACTGTCTGCCACAAACAATCTTGTCCAGTGGACAATTTCTTTGAATATGCACCCAAATCCCCAATTCCTTGTTTTTGTGCAGCACCTCTAAGAATTGGATATAGGCTTAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTATATAACTCATTTCGAAACATACATAACTGACTCCTTAAACTTAAGCTTCTATCAGTTATCAATAGATTCTTATGATTGGGAAGAGGGTCCTCGTCTTAGAATCTATTTAAAACTTTTTCCTTCATACAATGATTCTCACTCTAACACATTCAACACAAGTGAGGTCCGTCGCATTCTTAGCATCTTTACATCGTGGCGCTTTCCTCGCACGGATCTTTTTGGACCATATGAACTCCTGAATGTCACTCTTCTAGGACCATATGCAAATATAATTATTCCTACAGAGGGGGAAAAGAGAAGTACAGGCATAATAGTTGCCATTATAATAGCAGTTGTTGCTAGTGTTTTAGCAATATCTGCAATGATCATTCTTCTAATTTTTAGAAGAAATTTGAAATACCAGCAACTGATTTCCAGGAAACGCATGTCCTCTAATGTATGTATCAAAATAGATGGTTTGAAAGCATTCACTTTCAAAGAGTTGACTCATGCTACCAACAAATTTGATATCTCAACTAAAGTTGGTCAAGGAGGTTATGGAAATGTCTATAAGGGTATTTTATCTGATGAAACATTTGTTGCCGTTAAGCGAGCAGGAGAAAATTCATtacaaggccaaaaagagttcttgactgagattgagcttttatcacggttacaccatcgaaatcTTGTCTCACTAATTGGCTATTGTAACGAAGAAGGGGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGAATGGATTTCTGGTAAAAGAAAAATATCCAAAGAAGGTCTAAATTTTTGCATGAGATTAAGGATTGCAATGGGTGCATCCAAAGGCATACTGTATCTGCATACAGAGGCTAACCCTCCTATATACCACAGAGATATTAAAGCCAGCAACATACTTCTAGATTCCAAGTTTACTGCTAAAGTGGCTGATTTTGGATTGTCACGACTTATACCATACTCAGATGAAGAGGGAACTGTACCTAAATATGTGTCAACAGTTGTGAAGGGAACACCGGGTTACCTAGACCCAGAATATATGATGACTCATAAGTTAACTGATAAAAGTGATGTATACAGCCTAGGAATTGTGTTTTTGGAGCTTTTGACCGGCATGCAACCAATATTTCTTGGGAAAAATATTGTCCGCGAGGTTAATCTGGCTTATCAATCGGGCTCGATAGATACCATTATAGATAGCAAAATGGGTTTGTATCCATCCGAATGCTTGGACAAGTTCTTAACTCTGGCCCTCAGTTGCTGTCATGACCATCCAGAAGAAAGACCATCAATGATAGATGTGGTGAGGGAATTGGAAGACATTATTGCCTTGTTACCTGAAACTGAAATTAGTTTATCAGATGTTTCCTTAGATAACTCTGGCAAAATGGCACCCtcatcttcatcatcatcaacaacaacaacatcaGGATACCATGCGACAAGAAAGGAGCAGCAGCACATGTCCTCATATGTGTCAGGAAGTAATCTAGTCAGTGATATTATTCCTACTATTGTTCCTCGCTGA 2892 0.3759 MWTLGVHGYALAVSFCFIILMVASQRTDPSEVIALKDIKMSLIDPMDKLRNWNKGDPCARNWTGVWCFDKKGDDGYFHIRELYLMAMNLSGTLVPQLGLLSHLEIMDFMWNNLTGTIPKEIGNITSLRLLLLTGNKLAGSLPEELGNLSNLNRLQLDENQLSGPVPESFANLVNVRHLHMNNNSFNGQLPSKLSNLSNLLHLLLDNNNLSGYLPPEFSKLHSLAILQLDNNNFSGNGIPSTYETLPRLVKLSLRNCSLQGAIPDFSSIPRLKYLDLSWNQFTGPIPSNKLADNMTTIDLSHNKLNGSIPRGLVYPHLQRLELENNLLSGSVRATIWQNISFSRKAKLIINLYNNLFSGILGDLNPPANVTLRLSGNPVCKNSNIQRIGQYCALERDELDEEFANSTTVCHKQSCPVDNFFEYAPKSPIPCFCAAPLRIGYRLKSPSFSYFPPYITHFETYITDSLNLSFYQLSIDSYDWEEGPRLRIYLKLFPSYNDSHSNTFNTSEVRRILSIFTSWRFPRTDLFGPYELLNVTLLGPYANIIIPTEGEKRSTGIIVAIIIAVVASVLAISAMIILLIFRRNLKYQQLISRKRMSSNVCIKIDGLKAFTFKELTHATNKFDISTKVGQGGYGNVYKGILSDETFVAVKRAGENSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEGEQMLVYEFMPNGTLREWISGKRKISKEGLNFCMRLRIAMGASKGILYLHTEANPPIYHRDIKASNILLDSKFTAKVADFGLSRLIPYSDEEGTVPKYVSTVVKGTPGYLDPEYMMTHKLTDKSDVYSLGIVFLELLTGMQPIFLGKNIVREVNLAYQSGSIDTIIDSKMGLYPSECLDKFLTLALSCCHDHPEERPSMIDVVRELEDIIALLPETEISLSDVSLDNSGKMAPSSSSSSTTTTSGYHATRKEQQHMSSYVSGSNLVSDIIPTIVPR 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01427 963 ProSiteProfiles Protein kinase domain profile. 621 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01427 963 Gene3D Transferase(Phosphotransferase) domain 1 697 908 - -
Car03g01427 963 CDD STKc_IRAK 627 896 - -
Car03g01427 963 Gene3D Ribonuclease Inhibitor 239 422 IPR032675 -
Car03g01427 963 Gene3D Ribonuclease Inhibitor 30 145 IPR032675 -
Car03g01427 963 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 929 - -
Car03g01427 963 MobiDBLite consensus disorder prediction 911 946 - -
Car03g01427 963 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 12 929 - -
Car03g01427 963 SMART serkin_6 621 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01427 963 Gene3D Ribonuclease Inhibitor 146 238 IPR032675 -
Car03g01427 963 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Car03g01427 963 Gene3D Phosphorylase Kinase; domain 1 591 696 - -
Car03g01427 963 Pfam Protein kinase domain 623 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01427 963 SUPERFAMILY L domain-like 44 386 - -
Car03g01427 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Car03g01427 963 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Car03g01427 963 SUPERFAMILY Protein kinase-like (PK-like) 606 925 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01427 Car-Chr3 59583300 59591247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01427 9 904 Receptor kinase-like Gene Family AT5G01950 60.778 0.0 1085
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Car03g01427 Pkinase 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01427 - - gmx:100815005 1447.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01427 03 59583300 59591247 Car03g01427 03 59583300 59591247 ECH