Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01422 ATGATGCCACAATCCTACTCTGTCACTATACAAATTTTGTTACTACTACTTGTGTTACCTCAAACTAAAGCTGATTTAAATTCAGAAAAGCAAGCACTTCTTGATTTTATTGATGCAGTTCATCATGGTGAAAAAGTCAATTGGAGTTTTAGTACCTCAATATGCACTTCTTGGGTGGGAATTTCATGTAGTCCTGATGGTTCTCATGTTTGTTCTGTGAGGCTACCGGGCATTGGATTGCGCGGTTCTCTCCCGGAAAACACCATTGGTAAGTTACATGGTCTCGTCGGTCTCAGTCTCAGGTCTAACACTTTGAGTGGAAACCTTCCAAGTGACATATTTTCCCTTCCTTCTTTAAGATTTTTATATCTTCAACATAACAACTTTTCAGGTCATATTCCTGATAATTTGCCACCTCATCTTATGTTTCTTGATTTGTCATATAACTCTTTCACTGGAAAAATTCCAAGCATAATCCAAAGCTTGACATTTCTAATAGGACTAGACCTACAAAATAACTCTCTCATAGGACCTATTCCTAATGTTGTTGATCTTCCTAACCTTAAGAGTTTGAATTTGAGCTTTAACTATCTGAATGGTTCAATTCCTTCAGGGTTTCATAAGTTTCATGCATCCTCATTTAAAGGGAATTTGATGTTATGTGGTGCACCTTTGAAACAATTTTCTTTAGCTTCTTCTACTCCTATTTTGTCTCCACTAATAGTGTCACAAAAAGTACCAAGTGATATCTCAAACAAGAAGCTGAATACATGGACAAAAGTTGCTATTGCTTTGGGAGTTTTAGCAGTGATGTTGATTCCTGTTGTTATAGTAGTATTCTGTTGTTTCAAGAAAAAAGTGGGTGAACAAAATGTTACACCTAAAGAGAAAGGGGAGAAGCTTATTATGGAGGAATTTGGAAGTGGTGTGCAAACAAATGAGAGAAACAGGTTAATGTTTTTTGAAGGTTGTTGTTATAATTTTGATCTTGATGATTTGTTGAGAGCCTCAGCTGAAGTACTTGGGAAGGGAAGTTGTGGAACAACTTATAAAGCCATTTTGGAAGAAGGGACAATATTGGTTGTTAAGAGATTAAAAGAAGTGGCAGTGGTGAAAAGAGAATTTGAACAGCAAATGGAGATTGTCCAAAGGCTTGATCACCACCCAAATGTAGTTCGCCCTCTTGCTTACTATTATTCCAAGGATGAAAAATTAATGGTTTATGACTACTTCACAACTGGAAGCTTTTCCAAGTTATTGCATGGATCAAGTGAAATGGGACGAACTCCACTAGATTGGGATTCCAGATTGAAGATCATGGCAGGAGCTGCTAAGGGCATTGCTCATATCCACTCAGCCAATGGAAGGAAACTTGTCCATGGCAATATAAAATCATCCAATGTGCTTCTCTCAATAGATCTTCAAGGCAGCATATCAGATTTCGGACTAACACCTCTAACAAGTTTATGTGTCTCCCCCAAAAGTCCTCCGGGTTACCAAGCACCGGAGGTGAACGAGAGCAGAAAATCCACACAAAAATCCGATGTATACAGCTTTGGCGTTCTTCTTCTTGAGATGCTGACTGGGAAAACGCCAGCTCAGTATTCAGGACATGATGATGTGGTTGATCTTCCAAAATGGGTTCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGATATCCAAACATTGAAGAAGAACTGGTGCAGATGTTGCAACTGGCAATGGCATGTGTAGCAGTGATGCCTGACACAAGGCCTTCAATGGAGGAAGTAGTTAAGATGATTGAAGACATCAGAGCATCCATTTATTAG 1836 0.3878 MMPQSYSVTIQILLLLLVLPQTKADLNSEKQALLDFIDAVHHGEKVNWSFSTSICTSWVGISCSPDGSHVCSVRLPGIGLRGSLPENTIGKLHGLVGLSLRSNTLSGNLPSDIFSLPSLRFLYLQHNNFSGHIPDNLPPHLMFLDLSYNSFTGKIPSIIQSLTFLIGLDLQNNSLIGPIPNVVDLPNLKSLNLSFNYLNGSIPSGFHKFHASSFKGNLMLCGAPLKQFSLASSTPILSPLIVSQKVPSDISNKKLNTWTKVAIALGVLAVMLIPVVIVVFCCFKKKVGEQNVTPKEKGEKLIMEEFGSGVQTNERNRLMFFEGCCYNFDLDDLLRASAEVLGKGSCGTTYKAILEEGTILVVKRLKEVAVVKREFEQQMEIVQRLDHHPNVVRPLAYYYSKDEKLMVYDYFTTGSFSKLLHGSSEMGRTPLDWDSRLKIMAGAAKGIAHIHSANGRKLVHGNIKSSNVLLSIDLQGSISDFGLTPLTSLCVSPKSPPGYQAPEVNESRKSTQKSDVYSFGVLLLEMLTGKTPAQYSGHDDVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLAMACVAVMPDTRPSMEEVVKMIEDIRASIY 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01422 611 PANTHER OS05G0588300 PROTEIN 8 609 - -
Car03g01422 611 PANTHER OS05G0480400 PROTEIN 8 609 - -
Car03g01422 611 Gene3D Ribonuclease Inhibitor 182 228 IPR032675 -
Car03g01422 611 Gene3D Phosphorylase Kinase; domain 1 302 410 - -
Car03g01422 611 SMART LRR_typ_2 116 140 IPR003591 -
Car03g01422 611 SMART LRR_typ_2 185 208 IPR003591 -
Car03g01422 611 Gene3D Transferase(Phosphotransferase) domain 1 412 610 - -
Car03g01422 611 ProSiteProfiles Protein kinase domain profile. 335 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01422 611 Pfam Protein kinase domain 338 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01422 611 Pfam Leucine Rich Repeat 187 209 IPR001611 GO:0005515
Car03g01422 611 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515
Car03g01422 611 SUPERFAMILY L domain-like 45 224 - -
Car03g01422 611 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Car03g01422 611 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Car03g01422 611 CDD STKc_IRAK 341 606 - -
Car03g01422 611 SUPERFAMILY Protein kinase-like (PK-like) 339 603 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01422 Car-Chr3 59535997 59538297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01422 24 609 Receptor kinase-like Gene Family AT5G58300 59.560 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car03g01422 Pkinase 3.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01422 - - gmx:100810832 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01422 03 59535997 59538297 Car03g01422 03 59535997 59538297 ECH