Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01415 ATGTCTTCTCTACTCTCTACAACTACAACTACACTTCAACATACTCATAATAAAATCTTCTTCTCTCCTCTAAAACTCACCACCTCATTTAACAGTTCTTTCTCAGCAAACCATTTCAACACTCATTCTATTATAAGGTGCAATGCACTTTCTGATATCATCCCCAAAGACTTATTTAAGAACACTTATTATTTGGATCAGTTTCAGAGTGTGAGTGAGGACTTAACAGACATGCAAAGGTTTGGGATTTTGGTATTTGTTGGGTTGACATGGTTTTACTTAACTGCAAGACCAGGTGTTCTTTTTGGTGCCATTGATGCATTCCTTTTGGCTCCAATGCAATTTGTTTTGGATAGTTTATCTGGAAGGAGAAACATGAAAAGAAGTGATTTCTTGATTGGTAGTAAGATAGGAGAAGGGTCATTTGGTGTTGTTTATTCTGGTGTTTTGGTTCCAAAGAATGTGGATGTAAAAGAGATGATGATGCAGAAGAGTGGAAGAGGCAATTTGGATGCTAATTCTAAGGATAAAGTCATTCTTAAAAAGGTAAAGGTTGGAGTTGAAGGAGCTAAAGAATTTGGTGATTATGAAGAGTGGTTTAATTACAGACTCTCCAGAGCAGCTCCTGAAACATGTGCTAAGTTCCTTGGAAGTTTTGTAGCTGATAAAAGCAATTCCCAATTCATAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGACCGTTCTCTTGCTGATTACATGACAGATAAAAACTTCCCTTCAAACTTAGAGTCTGTCATGTTTGGAAGTGTCTTGCAAGGTGTAGACTTTTCCAAAAGAAATGCACTGATCATCAAGCAAATAATGCGCCAGATCATTACATCTCTTAAGAAAATTCATGACACTGGCATTGTTCATAGGGATGTAAAGCCTTCCAATTTGGTTGTTACAAAACAAGGGCAGATTAAACTCATTGATTTTGGTGCTGCAACAGACCTTAGAATTGGAAAGAATTATGTTTCTAACTATACGCCTTTGGATCCTGACTACTGTCCACCTGAACTATATGTGCTACCACAAGAAACACAAAGTCTTCCTCCAGAACCAATTGCAGCTTTACTTTCACCAATCATGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCTGCTGGGGTTGTACTCCTTCAAATGGCAATACCAACATTAAGATCTCAAGCTGCTTTAAAGAATTTCAATTTGGAAATGAGAACATATGGATATGATTTGAACAAATGGAAGGACTCCACTCGCATGAAGTCGAACTCCAAAATCCTTGATAATGATTCCGGTAGAGGGTGGGACTTAGCATCAAAACTTATCTCCAAAAGAGATTCCGGAAGAAGACAGCGTTTATCTGCTGCTTCTGCTTTGAGACATCCTTATTTTCTTCTAGGTGGTGATCAGGCAGCTGTAGTTCTTTCAAAATTGAGCTTTAGCACAAAGTGA 1476 0.3794 MSSLLSTTTTTLQHTHNKIFFSPLKLTTSFNSSFSANHFNTHSIIRCNALSDIIPKDLFKNTYYLDQFQSVSEDLTDMQRFGILVFVGLTWFYLTARPGVLFGAIDAFLLAPMQFVLDSLSGRRNMKRSDFLIGSKIGEGSFGVVYSGVLVPKNVDVKEMMMQKSGRGNLDANSKDKVILKKVKVGVEGAKEFGDYEEWFNYRLSRAAPETCAKFLGSFVADKSNSQFIKGGKWLVWKFEGDRSLADYMTDKNFPSNLESVMFGSVLQGVDFSKRNALIIKQIMRQIITSLKKIHDTGIVHRDVKPSNLVVTKQGQIKLIDFGAATDLRIGKNYVSNYTPLDPDYCPPELYVLPQETQSLPPEPIAALLSPIMWQLNSPDLFDMYSAGVVLLQMAIPTLRSQAALKNFNLEMRTYGYDLNKWKDSTRMKSNSKILDNDSGRGWDLASKLISKRDSGRRQRLSAASALRHPYFLLGGDQAAVVLSKLSFSTK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01415 491 SMART serkin_6 131 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01415 491 SUPERFAMILY Protein kinase-like (PK-like) 128 473 IPR011009 -
Car03g01415 491 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 6 489 IPR044803 GO:0004674|GO:0009579
Car03g01415 491 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 6 489 - -
Car03g01415 491 ProSiteProfiles Protein kinase domain profile. 131 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01415 491 Pfam Protein kinase domain 279 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01415 491 Gene3D Phosphorylase Kinase; domain 1 120 239 - -
Car03g01415 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Car03g01415 491 Gene3D Transferase(Phosphotransferase) domain 1 272 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01415 Car-Chr3 59485077 59490753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01415 131 328 MAP Kinase Kinase Kinase AT3G13530 23.000 1.44e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Car03g01415 Pkinase 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01415 - - gmx:100795624 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01415 03 59485077 59490753 Car03g01415 03 59485077 59490753 ECH
Car07g03428 07 62376378 62380054 Car03g01415 03 59485077 59490753 PCT