Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01414 ATGGTTTCCTCTCAGTTTTCTGGTTTGACTATGGCTGGCATGTATAAACCGTTACTTTTTCCAGTAAACGATCCTGGTACTGCAAGCACAGATCACATTGAGCTAGATTTCTGTGACGTCTTTGGTCCACTTACAGTTGAAGTCAATAACATTGATTCCGCTACTGGTGAGTCCATTGAAGAATCCAGCGAGTTGGTTTATGATGACCCAGCAGTCATTTACACCCGCTCACATTCTCTGGTTGGTCCTTCTAATTGTATTAGTCAATCACTTAAACTCAGTAAGCTCACCATACACGAGTCTGATGATTCATTGGAACTAGTGGAGCGCCTCAGTGAAGAGACCATTGAAGACATCAAAGAATCTTCCTTTGACAATGTTGTCATTGAGGAATCTCTGAATAATGAGAACGCCATGAAGATCCAAAGAGTTAGCATTGAAGATTTTGAGATTTTGAAGGTTGTGGGGCAGGGTGCATTTGCAAAAGTATATCAGGTGAGGAAAAAGGGCACTTCAGAAATATATGCTATGAAGGTTATGCGGAAGGACAAGATTATGGAGAAGAACCATGCTGAATACATGAAAGCTGAGAGGGAGATTTTGACAAAGATAGAGCACCCCTTTGTTGTACAACTAAGATACTCTTTTCAGACCAAATACAGATTGTATCTTGTGCTTGATTTTGTTAATGGGGGCCATCTCTTCTTTCAACTTTATCACCAGGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCCGAGATTGTTTCTGCAGTTTCCCATCTCCACTCAAATGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTTATGGATGCTGATGGCCATGTTATGTTGACCGATTTTGGCCTAGCAAAACAATTTGAAGAAAGTGCACGATCTAATTCGATGTGTGGTACGTTAGAGTACATGGCGCCTGAAATTATTATTGGCAAGGGCCATGATAAGGCTGCCGATTGGTGGAGTGTAGGTGTCTTACTGTTCGAGATGCTTACTGGGAAGCCGCCCTTCTGTGGTGGGAACCGTGAGAAGATTCAGCAGAAGATAGTGAAAGATAGGATTAAGCTGCCAGGGTATTTGTCAAGTGAAGCACATTCACTGTTGAAAGGGCTTCTACAGAAGGAGGCACCAAAGCGGTTAGGTTGTGGAGCTAAAGGGATTGGTGAAATCAAAGGCCACAAGTGGTTCAAACCAATCAATTGGAAGAAGTTGGATGCACGTGAAATTCAACCAAGCTTCCGGCCAGATGTAGCAGGAAAGTACTGTGTTGCCAACTTTGAGAAGCGCTGGACTGATATGCCGGTTGTGGATTCACCAGCTGCCAGTCCGAATGGGGGAAATCCCTTCAAGGATTTCTCTTATGCGAGACCTGCAGCCTCTTTTCTTCAAATGAATAGCCCTGCTTGCTAA 1437 0.4335 MVSSQFSGLTMAGMYKPLLFPVNDPGTASTDHIELDFCDVFGPLTVEVNNIDSATGESIEESSELVYDDPAVIYTRSHSLVGPSNCISQSLKLSKLTIHESDDSLELVERLSEETIEDIKESSFDNVVIEESLNNENAMKIQRVSIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAEREILTKIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHSNGIMHRDLKPENILMDADGHVMLTDFGLAKQFEESARSNSMCGTLEYMAPEIIIGKGHDKAADWWSVGVLLFEMLTGKPPFCGGNREKIQQKIVKDRIKLPGYLSSEAHSLLKGLLQKEAPKRLGCGAKGIGEIKGHKWFKPINWKKLDAREIQPSFRPDVAGKYCVANFEKRWTDMPVVDSPAASPNGGNPFKDFSYARPAASFLQMNSPAC 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01414 478 Pfam Protein kinase C terminal domain 427 463 IPR017892 GO:0004674|GO:0005524|GO:0006468
Car03g01414 478 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Car03g01414 478 Gene3D Phosphorylase Kinase; domain 1 146 446 - -
Car03g01414 478 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 475 - -
Car03g01414 478 ProSiteProfiles AGC-kinase C-terminal domain profile. 406 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car03g01414 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Car03g01414 478 SMART pkinase_C_6 406 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car03g01414 478 ProSiteProfiles Protein kinase domain profile. 149 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01414 478 CDD STKc_AGC 155 405 IPR045270 GO:0004674|GO:0005524
Car03g01414 478 Gene3D Transferase(Phosphotransferase) domain 1 229 424 - -
Car03g01414 478 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 475 - -
Car03g01414 478 Pfam Protein kinase domain 149 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01414 478 SUPERFAMILY Protein kinase-like (PK-like) 146 464 IPR011009 -
Car03g01414 478 SMART serkin_6 149 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01414 Car-Chr3 59478568 59482838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01414 1 475 AGC Kinase Gene Family AT3G08720 66.667 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Car03g01414 Pkinase 8.7e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01414 K04688 - gmx:100804819 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01414 03 59478568 59482838 Car03g01414 03 59478568 59482838 ECH