Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01411 ATGAGTTCTGATCAACCATTGCTTTCGGAACCAGATCTCGTTCCTCCTGTGATCCATCACCGCCACCGGAAATCAGGATCCCGCACTTCCTTCTTCGACGAAGCTGTTGAATCTCCTCCAACCTCCGATTCCGGCCACCATCACCACCACCGGGAAGTTGTTTTGGCGAGAGATTGCAGCTTCCATTCAGCATTCTGCAACAACAACCACAACAACAGCAGCAGCAGTAACGGCATTTCCACTTTAACAGAGCTTCAATCTCCTGATTCGCAGTTTCCTTTGGAATGCCCCGCGCGGGAAAGGGGACGCCTGCGATCTCGGGGTGCAATGGAACTGTATGATTCCAATACTACTGTGCCCTTTGAAATTTcaacaacatcatcagcagcagcggcatctgcagcagtcacaacagcTCCGTCCCGCAGGATTCGCCATAAAAGTGTGCAGTTTGATGAACAAATCTTACATGATGATAGGGCTAGGTTGATTTATATAAATGATCCTAAGAAAACCAATGATAAGTACGAGTTTACTGGGAATGAGATTCGAACTAGTAGATACACTTTTATTACGTTTTTGCCTAAGAATCTATTTATTCAGTTCCATAGGGTTGCTTATTTGTATTTCCTTGCTATTGCTGCACTCAATCAGCTTCCACCCTTAGCTGTGTTTGGGAGGACAGTGTCCCTTTTTCCGCTTTTGTTTGTCCTTTGTGTTACTGCTATTAAGGATGGGTATGAGGATTGGAGGAGACATAGGTCGGATAACAATGAGAATAATCGCGAGTCTTTGGTTCTTCAGTCCGGTGATTTCCGGTCCAAGATATGGAAAAAGATTCAGGCTGGTGAGACAATGAATTTGGATGGAGAATCGAATTTGAAGACGAGGTATGCCAAGCAGGAAACGGCTTCTGCAGTATCGTCAGAGGTTTGTGATGTTTCTGGTATTATTAGATGCGAGCAGCCGAACAGGAATATTTATGAGTTCACAGCTAATATAGAGTTCAATGGAATTAAGTTTTCCCTTAGCCAGTCAAACATTGTCCTGCGAGGTTGCCAACTGAAGAACACGGATTGGATAATTGGTGTTGTGGTTTATGCAGGACAGGAAACAAAAGCCATGCTGAACAGTGCGGCTTCTCCTTCCAAGAGAAGCAGACTGGAATGTTATATGAATAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTTATCATGTGTTTGGTTGTGGCCCTTGGGATGTGTCTTTGGCTGGTACGCCACGAAAACCAGCTTGATACCTTGCCTTACTACAGAAAAAGATACCTCAACAATGGCCCGGATAATGGAAAGAAATATAAGTTTTATGGGATACCAATGGAAGCGTTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCCATATCTCTTTACATCACAATGGAGTTAGTTAGATTGGGTCAGTCATACTTCATGATTGAAGACTTGGATATGTATGACGCTAACTCTGGATCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAAACAGGAACACTAACTGAAAACAAGATGGAATTCCGGAGGGCTAGTGTAAATGGGAAGAATTATGGGAGCTCCTTGCTTACTGCTGATAATAATTCAGCAGCAGATATTCCTAAACAGAGATGGAAGCTCAAATCTGAAATTGCAGTTGATCCCAAATTAATGATTATGTTGCATAAAAACTCAAATAGAGATGAAAGAATAACTGCCCATGAGTTTTTTCTTACATTGGCTGCTTGTAATACTGTGATTCCTATACTTAGTGATGGTGTATTTTCTGGTTGTGGAACAAGTAAATCAAACGAATTTGTCAAATGCATTGATTACCAGGGAGAATCCCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCATATGGATATACTCTTTTTGAACGGACATCTGGACATATTGTTATTGACATCAACGGTGAGAAACTCAGATTGGACGTATTGGGCCTGCATGAGTTTGATAGTGTTCGAAAGAGGATGTCCGTTGTTATTAGGTTTCCTGACAATGTTGTTAAGGTGCTAGTCAAAGGCGCTGATACTTCAATGTTTAGCATTTTGGCAAATGGTAGTGAGAGCAGCAATAGCTTATTGCAAGCAACTCAGAGCCATTTGAGTGAATATTCTTCACAAGGTTTGCGCACCCTTGTAGTTGCCTCTAGAAGTCTTTCTGATGCTGAACTTAGGGAATGGCAAAGTAGGTATGGAGAAGCAAGCACCGCGTTAACCGACAGAGCTACTAAACTACGTCACACGGCAGGTCTTATAGAATGCAATTTAAATCTACTTGGAGCAACCGGAATTGAGGACAAGCTGCAAGAAGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACAGGTGATAAACAAGAGACGGCAATTTCAATTGGCCTTTCCTGCAAACTTCTCAGTGCAGATATGCAGCAAATTATCATAAATGGCACCTCAGAGGAGGAATGCAGAAATCTTTTGGGCGACGCAATAGGCAAATATGGTGTGAGATCTTCAAGTAGAGGGCATCAGAATCTGAAGCATAAAACCAGTGCTGAAGATGGTGATCTTGATCTTCCCAATGGTTCAAAGTCAACGAGTTTGCCCAAGTGGAATCCAGGAAAGGAAGAAGGAACTACTACTTCATTGGCACTCATAATTGATGGGAACAGTTTGGTTTATATTTTAGAGAAGGATCTGGAGTCAGAGCTTTTTGACCTTGCAACTTCCTGTAAGGTTGTACTGTGTTGTCGTGTTGCACCCTTGCAGAAGGCTGGAATTGTTGATCTGATAAAGAGCCGCACAGATGATATGACCCTGGCCATAGGCGATGGGGCCAACGATGTGTCAATGATCCAAATGGCAGATGTCGGTGTTGGAATATGTGGGCAAGAAGGACGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAATTTCAGTTTTTGAAAAGATTACTTCTTGTTCATGGCCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGTTGTTCTGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCATTAACAGATTGGAGTAGTGTATTCTATTCTGTGATATACACATCTGTACCCACAATTTTTGTTGGCATTTTGGACAAAGACTTGAGTCATAAGACACTCTTGCAGTATCCGAAACTGTATGGTACTGGTTACAGGCAAGAAGCTTATAATATGCAATTATTTTGGATCACAATGATTGACACAGTATGGCAGAGCCTTGTTCTCTTTTACACGCCGTTGTTCACCTATAAGGATAGTTCGATTGATATATGGAGCATGGGAAGCTTGTGGACAATTGCAGTTGTTATCCTTGTAAATGCACACCTGGCTATGGACATCAACCGTTGGCTCTTAATTACTCATCTTGCTGTCTGGGGATCCATAATCATAACATATGGTTGCATGGTGATATTGGATTCCATACCTGCCTTTCCTAATTACTGGACTATTTATCATCTGGCAAGGTCTCCTACATACTGGATAACAATTTTGCTTATAATAATCGTGGCATTGCTACCTCGCTTTACTTGCAAAGTTGTTTACCAAATCTTCTGGCCTTCAGATATCCAGATAGCCAGAGAAGCTGAGTTATTGAGAAAACGACAAAATCGTTCGCAGTCAAGGCAACAAGGTTCCAGTTAA 3807 0.4121 MSSDQPLLSEPDLVPPVIHHRHRKSGSRTSFFDEAVESPPTSDSGHHHHHREVVLARDCSFHSAFCNNNHNNSSSSNGISTLTELQSPDSQFPLECPARERGRLRSRGAMELYDSNTTVPFEISTTSSAAAASAAVTTAPSRRIRHKSVQFDEQILHDDRARLIYINDPKKTNDKYEFTGNEIRTSRYTFITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDNNENNRESLVLQSGDFRSKIWKKIQAGETMNLDGESNLKTRYAKQETASAVSSEVCDVSGIIRCEQPNRNIYEFTANIEFNGIKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLECYMNRETLWLSIFLFIMCLVVALGMCLWLVRHENQLDTLPYYRKRYLNNGPDNGKKYKFYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDLDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVNGKNYGSSLLTADNNSAADIPKQRWKLKSEIAVDPKLMIMLHKNSNRDERITAHEFFLTLAACNTVIPILSDGVFSGCGTSKSNEFVKCIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMFSILANGSESSNSLLQATQSHLSEYSSQGLRTLVVASRSLSDAELREWQSRYGEASTALTDRATKLRHTAGLIECNLNLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIIINGTSEEECRNLLGDAIGKYGVRSSSRGHQNLKHKTSAEDGDLDLPNGSKSTSLPKWNPGKEEGTTTSLALIIDGNSLVYILEKDLESELFDLATSCKVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIFVGILDKDLSHKTLLQYPKLYGTGYRQEAYNMQLFWITMIDTVWQSLVLFYTPLFTYKDSSIDIWSMGSLWTIAVVILVNAHLAMDINRWLLITHLAVWGSIIITYGCMVILDSIPAFPNYWTIYHLARSPTYWITILLIIIVALLPRFTCKVVYQIFWPSDIQIAREAELLRKRQNRSQSRQQGSS 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01411 1268 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 528 803 IPR023299 GO:0000166
Car03g01411 1268 Gene3D - 787 1014 IPR023214 -
Car03g01411 1268 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 154 1265 - -
Car03g01411 1268 MobiDBLite consensus disorder prediction 73 90 - -
Car03g01411 1268 Gene3D - 630 767 IPR023299 GO:0000166
Car03g01411 1268 PRINTS P-type cation-transporting ATPase superfamily signature 522 536 - -
Car03g01411 1268 PRINTS P-type cation-transporting ATPase superfamily signature 974 993 - -
Car03g01411 1268 MobiDBLite consensus disorder prediction 892 909 - -
Car03g01411 1268 MobiDBLite consensus disorder prediction 73 93 - -
Car03g01411 1268 SFLD p-type atpase 506 1025 IPR044492 -
Car03g01411 1268 SUPERFAMILY HAD-like 509 1019 IPR036412 -
Car03g01411 1268 MobiDBLite consensus disorder prediction 870 909 - -
Car03g01411 1268 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 284 1249 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Car03g01411 1268 SFLD Haloacid Dehalogenase 506 1025 - -
Car03g01411 1268 Pfam Phospholipid-translocating ATPase N-terminal 164 229 IPR032631 -
Car03g01411 1268 Pfam Phospholipid-translocating P-type ATPase C-terminal 1002 1242 IPR032630 -
Car03g01411 1268 Pfam Cation transport ATPase (P-type) 637 711 - -
Car03g01411 1268 Gene3D - 519 531 IPR023214 -
Car03g01411 1268 CDD P-type_ATPase_APLT_Dnf-like 180 1134 - -
Car03g01411 1268 Gene3D - 506 518 - -
Car03g01411 1268 ProSitePatterns E1-E2 ATPases phosphorylation site. 524 530 IPR018303 -
Car03g01411 1268 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 154 1265 - -
Car03g01411 1268 Gene3D - 532 567 IPR023299 GO:0000166
Car03g01411 1268 MobiDBLite consensus disorder prediction 1 49 - -
Car03g01411 1268 SUPERFAMILY Calcium ATPase, transmembrane domain M 178 1241 IPR023298 -
Car03g01411 1268 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 455 547 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car03g01411 1268 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 944 1060 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01411 Car-Chr3 59415333 59422161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01411 141 1253 Primary Pumps ATPases AT5G04930 55.642 0.0 1273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01411 K14802 - gmx:100789830 2026.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01411 03 59415333 59422161 Car03g01411 03 59415333 59422161 ECH