Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01410 ATGGAAAATGAAAATCTAGGTCATGGTCGTGGAAAGATAATTGAGGAGCTATTAAGAGGGCGTGATCTTGCAAACCAACTTAGACAAGTCATGAATGAAGGTGGTGatattgataataataataataataatGGATCAACAACACCATTTGCTGAACATCTTTTGATGGAAGTGCTTATGACCTTTACCAATTCTCTATTGTTCTTGAAGAATCCTTCCACTTCAGAATCCTTTGATGTCTCTGATTTGCAACTCACCAAATCTGAGGACTCTCTAGAGAGTAATTGCAAGAGTTCCATTCTTAAGGAAAGAAGAGGCTGTTACAAAAGAAGAAAAATTTTACAAACATGGGAGAAGGAGTCTGAATTTCCTGTGGAAGATGGTCATCAATGGAGAAAGTATGGCCAAAAAAAGATTCTACACAACGATTTTCCAAGAAACTATTTCAGGTGCACTCACAAACATGACCAAGGTTGCAAAGCAACAAAACAAGTGCAAAAAATAAGAGAGGAACCACCTCTTCACAAAACAACCTACTATGGTCACCACACATGTAAAGTGTTGCTAAACCCTGAAATTATAGTGGATTCACTTTCACCTTCTGATCACTCTTCCATGTTCCTTAGCTTTGACAATTCCTTCCCAACACCAACCAAACAAGATTGTCCTTTTCTCTCTTCATCTGGGAAAAGGGAGTGCAAAAAGGAAGATAATATTTTAGTTAATATtcctcctcctcctcctccttcatcttccAACAATGATTACCTCTCTGAACTCACTTTTGATGAATCATCAACACTTGATTCAGATCATTTAGTTGTTGATATTCCTCATATCTTGTATGGTTCTTCTGGTTTTGATGAGGTCCTTAATTGGACTCTTTCTTGA 891 0.3524 MENENLGHGRGKIIEELLRGRDLANQLRQVMNEGGDIDNNNNNNGSTTPFAEHLLMEVLMTFTNSLLFLKNPSTSESFDVSDLQLTKSEDSLESNCKSSILKERRGCYKRRKILQTWEKESEFPVEDGHQWRKYGQKKILHNDFPRNYFRCTHKHDQGCKATKQVQKIREEPPLHKTTYYGHHTCKVLLNPEIIVDSLSPSDHSSMFLSFDNSFPTPTKQDCPFLSSSGKRECKKEDNILVNIPPPPPPSSSNNDYLSELTFDESSTLDSDHLVVDIPHILYGSSGFDEVLNWTLS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01410 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 280 IPR044810 GO:0003700
Car03g01410 296 SUPERFAMILY WRKY DNA-binding domain 123 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car03g01410 296 SMART WRKY_cls 125 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01410 296 ProSiteProfiles WRKY domain profile. 120 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01410 296 Pfam WRKY DNA -binding domain 126 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car03g01410 296 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 280 - -
Car03g01410 296 Gene3D WRKY domain 108 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01410 Car-Chr3 59401842 59403953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01410 12 185 WRKY Transcription Factor Family AT3G56400 40.217 6.34e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car03g01410 WRKY 7.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01410 - - mtr:MTR_7g073430 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01410 03 59401842 59403953 Car03g01410 03 59401842 59403953 ECH
Car03g01410 03 59401842 59403953 Car07g03427 07 62371139 62372312 PCT