Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01405 ATGATGGAATTCAGAAGCATGTGTTTGTTGTTTTTGATTCTTTTGATTTCAATTATGCAACCAGTGTTCTGTGTTGATGATCCTGTTTTCAATGATGATATATTGGGGTTAATTGTGTTTAAAGCTGGTTTAAAAGACCCTAATCACAAACTCTCTTCATGGAATGAAGATGATAACACTCCTTGTAATTGGGAAGGTGTGAAATGTGACCCTTCAAACAATAAAGTCACTTCACTTGTTCTTGATGGTTTCTCTCTTTCAGGACATGTTGATAGAGGCTTATTGAGATTGCAGTTTCTTCAAATTCTTTCACTTAAAGGTAACAACTTCACTGGTTTCATAAACCCTGATCTTCCTAAACTTGGAACTTTGCAAGTTGTTGATTTGAGTGATAATAATCTTCAAGGGACTATACCAGAAGAGTTTTTTCAACAATGTGGATCTTTGAGAACCGTTTCTTTTGCTAAGAATAATCTTACAGGTAAGATTCCTGATTCTATTGGCTCATGTGCTACTTTGACAAATGTTAACTTTTCTTCTAATCAAATTTATGGAGAATTTCCATCTGGTGTGTGGTTTTTGAGGGGGTTACAATCACTTGATCTTTCAAATAACTTGCTTGAAGGAGAAATTCCAGAAGGGATTCAAAATCTGTATGATATGAGAGAGTTGAGTTTAAAGAAGAATAGGTTTAGTGGTAGGATTCCTGAGGATATTGGTGGCTGCATAGTCTTAAAATCACTTGATTTGAGTGGAAATTTTCTATCTGGTGGAATTCCTAATTCAATGCAAAGACTCAGTTCATGTAATTCACTTAGTTTGCAAGGAAATTCACTCACAGGTAACATTCCTGATTGGATTGGTGAGTTGAAAGATCTAGAAAAATTGGATCTTTCATCAAATAGATTTTCTGGTTTGATTCCAAAGTCATTAGGAAATCTAGATATGCTGCAAATATTGAATTTTTCTAGGAATCAGTTAGTAGGAAACGTGCCTGATTCAATGATAAATTGTTCTAAGCTTTTGGCTATTGATATTAGTCACAATCAGTTGTTTGGTCATCTTCCTTCATGGACTTTTAGGATTGGTTTGCAAAGTTTATCCCTTTCTGGTAATAATTATCATGGTCTTGAGGTTTTGGATTTGTCATCCAATGCATTTTCCGGCGAACTTCCATCTGGTATTGGAGGACTTAGTAGCTTGCAACTCTTGAATATATCCAACAACAATTTATCTGGTTCTGTTCCTGTTGATATTGGTCAACTCAAATCTTTGTACATTGTTGATTTGAGTGGTAACAAGTTTAATGGAAGCATTCCTTTTGAAATAGAAGGTGCTATTTCACTTAGTGAGTTAAGGTTACAGAAGAATTTCCTTGGTGGGAGAATTCCGGCTCAAATCGCGAAGTGTTCATCTTTAACATCTTTGGTTCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCATCCATTGCAAACCTAACCAATCTTCAGCATGTAGATTTGTCATGGAATGAACTCTCTGGAAGTTTACCTAAAGAGCTAACAAATCTTTCCAATCTTTCATCATTTAATGTATCCTACAACCATCTTCAAGGTGAGTTACCGGTGGGCGGTTTCTTCAACACCATCTCCTCCTCATCGGTTACCGGTAACTCATTGTTGTGTGGTTCTGTTGTCAACCACTCCTGCCCGTCCGTTCATCCCAAACCGATTGTCTTAAATCCCAATTCTTCTGGTTCCAACTCTAGCGTTTCCTCACAATATCATCGACACAAGATCATACTTAGTATATCTGCTCTTATTGCTATTGGTGCAGCTGCTTCTATTGCCGTTGGTGTCGTGGCTATCACTGTCCTGAATATGCGCGTGCGTTCTGCAATGGAACAACGTTTGGCCACTCCATTTGCATTCTCTGGTGGTGAGGACTATGGCAACTCACCTGCGAATGATCCGAACTACGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCTGATGGAGCTCACAATCTTCTTAATAAAGAAAGCGAAATAGGCCGCGGTGGATTTGGAGTTGTTTATCGCACTTTTCTTCGAGACGGTCATGCTGTTGCAATCAAGAAGCTTATAGTCTCAAGTTTGATCAAGTCTCAAGAAGAATTTGAAAAGGAAGTAAAAAGGTTTGGGAAGATTAGGCACCAAAATCTTGTAGCACTTGAAGGTTATTATTGGACTTCATCGTTGCAGCTACTCATTTACGAGTTCTTATCAAGAGGTAGTTTGCATAAGCTTCTACACGGCGATAACAACAAAAACGTCTTATCTTGGCGACAAAGGTTCAAGATTATCCTTGGCATGGCAAAAGGGTTGTCACATTTGCACCAAATGAACATAATCCACTACAATCTCAAATCAACCAACGTTCTCATCCACTCTTCCGATGAACCGAAGATAGGAGATTTTGGCTTAGTGAAATTGTTGCCAATGCTAGACCATTGTGTATTGAGCAGCAAAATTCAAAGTGCATTAGGATACATGGCTCCTGAGTTCGCTTGCCGTACAGTTAAGATAACTGAGAAATGCGACGTGTATGGTTTCGGCATCCTTATTTTGGAGATAGTGACAGGAAAAAGACCTGTTGAATACATGGAAGATGATGTTGTTGTTCTTTGTGACATGGTGAGGGGGGCATTGGAAGAAGGAAAAGTTGAAGAATGTGTTGATGAAAGGCTTTTAGGTAATTTTGCAGCTGAAGAAGCAATTCCTGTGATTAAATTGGGATTAATTTGTGCATCACAAGTTCCATCAAATAGGCCAGATATGGATGAAGTAATCAATATATTAGAGTTAATTCAGTGCCCTTCAGAAGGACAAGAGGAGTTATTAGAATGA 2877 0.3823 MMEFRSMCLLFLILLISIMQPVFCVDDPVFNDDILGLIVFKAGLKDPNHKLSSWNEDDNTPCNWEGVKCDPSNNKVTSLVLDGFSLSGHVDRGLLRLQFLQILSLKGNNFTGFINPDLPKLGTLQVVDLSDNNLQGTIPEEFFQQCGSLRTVSFAKNNLTGKIPDSIGSCATLTNVNFSSNQIYGEFPSGVWFLRGLQSLDLSNNLLEGEIPEGIQNLYDMRELSLKKNRFSGRIPEDIGGCIVLKSLDLSGNFLSGGIPNSMQRLSSCNSLSLQGNSLTGNIPDWIGELKDLEKLDLSSNRFSGLIPKSLGNLDMLQILNFSRNQLVGNVPDSMINCSKLLAIDISHNQLFGHLPSWTFRIGLQSLSLSGNNYHGLEVLDLSSNAFSGELPSGIGGLSSLQLLNISNNNLSGSVPVDIGQLKSLYIVDLSGNKFNGSIPFEIEGAISLSELRLQKNFLGGRIPAQIAKCSSLTSLVLSHNKLTGSIPASIANLTNLQHVDLSWNELSGSLPKELTNLSNLSSFNVSYNHLQGELPVGGFFNTISSSSVTGNSLLCGSVVNHSCPSVHPKPIVLNPNSSGSNSSVSSQYHRHKIILSISALIAIGAAASIAVGVVAITVLNMRVRSAMEQRLATPFAFSGGEDYGNSPANDPNYGKLVMFSGDADFADGAHNLLNKESEIGRGGFGVVYRTFLRDGHAVAIKKLIVSSLIKSQEEFEKEVKRFGKIRHQNLVALEGYYWTSSLQLLIYEFLSRGSLHKLLHGDNNKNVLSWRQRFKIILGMAKGLSHLHQMNIIHYNLKSTNVLIHSSDEPKIGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILILEIVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEECVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMDEVINILELIQCPSEGQEELLE 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01405 958 Gene3D Ribonuclease Inhibitor 311 570 IPR032675 -
Car03g01405 958 PRINTS Leucine-rich repeat signature 293 306 - -
Car03g01405 958 PRINTS Leucine-rich repeat signature 398 411 - -
Car03g01405 958 ProSitePatterns Protein kinases ATP-binding region signature. 680 703 IPR017441 GO:0005524
Car03g01405 958 SMART LRR_sd22_2 194 217 - -
Car03g01405 958 SMART LRR_sd22_2 494 523 - -
Car03g01405 958 SMART LRR_sd22_2 290 316 - -
Car03g01405 958 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Car03g01405 958 Pfam Leucine rich repeat 448 507 IPR001611 GO:0005515
Car03g01405 958 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Car03g01405 958 Pfam Leucine rich repeat 293 351 IPR001611 GO:0005515
Car03g01405 958 SMART LRR_typ_2 518 542 IPR003591 -
Car03g01405 958 SMART LRR_typ_2 121 145 IPR003591 -
Car03g01405 958 SMART LRR_typ_2 494 517 IPR003591 -
Car03g01405 958 SMART LRR_typ_2 194 217 IPR003591 -
Car03g01405 958 SMART LRR_typ_2 290 313 IPR003591 -
Car03g01405 958 SMART LRR_typ_2 218 242 IPR003591 -
Car03g01405 958 SMART LRR_typ_2 314 338 IPR003591 -
Car03g01405 958 SMART LRR_typ_2 398 422 IPR003591 -
Car03g01405 958 Gene3D Ribonuclease Inhibitor 31 310 IPR032675 -
Car03g01405 958 SUPERFAMILY L domain-like 47 377 - -
Car03g01405 958 Gene3D Transferase(Phosphotransferase) domain 1 751 955 - -
Car03g01405 958 Gene3D Phosphorylase Kinase; domain 1 663 750 - -
Car03g01405 958 Pfam Protein kinase domain 675 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01405 958 SUPERFAMILY L domain-like 289 549 - -
Car03g01405 958 ProSiteProfiles Protein kinase domain profile. 674 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01405 958 Pfam Leucine Rich Repeat 197 218 IPR001611 GO:0005515
Car03g01405 958 Pfam Leucine Rich Repeat 245 266 IPR001611 GO:0005515
Car03g01405 958 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 12 948 - -
Car03g01405 958 CDD STKc_IRAK 680 946 - -
Car03g01405 958 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 948 - -
Car03g01405 958 SUPERFAMILY Protein kinase-like (PK-like) 676 942 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01405 Car-Chr3 59313591 59317977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01405 8 956 Receptor kinase-like Gene Family AT3G56370 61.627 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Car03g01405 PK_Tyr_Ser-Thr 4.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01405 - - mtr:MTR_7g073290 1570.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01405 03 59313591 59317977 Car03g01405 03 59313591 59317977 ECH