Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01399 ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAGAAGTCCGATCAGTTTGTATATGTAAAACGTGTAAGCCATAACGAGCATGCGCCTTCAGTACTTCCTGAACCTCAACCTCCTACTCGCTCACTACGATCCGCACCTCCTAGTTTTAGTACCACAGTGAAACCCATTCAACTTGTTAATAAAGTCACTAGCAATAGAATACGAGCATTATCTGCTCCATCGACTCTTGATGCAGCAGATCAAGATGCTTTGGCCTCAATTGAGTATGAGGAACAAGAAGAATCAAAATACCGAGGAGGATCAATGAAGGAGCAGCGGTCTTCTAGTCCACAACCTTTACCACTTCCATCTCCTCAGGGGGGAAGTGCATTGAAGGCTATCGGCAGCTTTAAGTTGGGGACTGCTAGTGGTCCTCTACATGCTTCTGGACCTTTGCCGCTTCCACCTACTGGGTCACTTCGGAACTTTCCGTATGAGGAAATTGCCGCTGCTTGCTACAATTTCTCTTCTGATCGATGCATGTCAGAATGTCTTTCGTCCACCATATACAAAGCTTACTTTGGTGATGATCCTTCAAGTTCAAAGAAGTTTGAAGCCACTGTCACACGTCTTCACCCATCACCTCAGGGATTGAAGGAATTCATAAACGAGGTTAATACTCTTGCATCTTTGCAACATCCAAACCTTTGTAAATTGCTAGGATTTCACGCTCGCGATGGTTCAGAACATAGAATGTTGGTCTATGAGAGACTATACCATGGAAGCTTGGACCGCCTATTGTATGGCAGATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCAATGTGTGCTGCGCAAGGTCTTACTTTCTTGCACGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCTAAGCTTTCCGGATATGGTTGTGTTGGACATATTCCTGAGGAAGAGATTTCCAGCAGTTCATCTGCTGTTGGAAACCTATCGATGGAGACACTGGAGAAAGGAATGTTGACCCCAAAGAGCAATGTGTGGAGCTTTGGAATTTTTCTTCTGGAGTTACTTACTGGAAGAAAGAATCTCGATAGCCGTCACCCGAAGGAAGAGAGGAATTTAGTCAAATGGAGCAAACCTTTCCTAGCGGATAATTATCGTTTATCGTTGATCATGGACCCTCAACTTAAAGGCCGCTTTCCTTCTAAAGCAGCAAGAACAATAGCCGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAAAGACCTACCATGAGAACTGTTGTTGAGAATCTAAAAATGATACAGGATTTGAAATACTCTTGCAGGTTCCCGTTGCAAGAACCAGCAGCATTATCTGGAAGAGAAATGTCGAGATCGCCAAGTCTTAATGGTATCGTCTGCCCTGCACCTAGGTTGAGCTTCTCTCCATCACGGCCGTCAGTAGCACCGGTACCAATTTCGCCTCCAAGATGGTCCGGGGTGCCTGTCCTTCCACCTCGAGCATGTTCTTCGACTCTCTCCTTGGAAGAGTTTGATAGGCAAGAAAGCCGCAAGTCGTCGTCCTCGGCGAGGAGGGCTAGTGTTGAAGGATTTTGA 1635 0.4495 MGCFTVLKSKKKKSDQFVYVKRVSHNEHAPSVLPEPQPPTRSLRSAPPSFSTTVKPIQLVNKVTSNRIRALSAPSTLDAADQDALASIEYEEQEESKYRGGSMKEQRSSSPQPLPLPSPQGGSALKAIGSFKLGTASGPLHASGPLPLPPTGSLRNFPYEEIAAACYNFSSDRCMSECLSSTIYKAYFGDDPSSSKKFEATVTRLHPSPQGLKEFINEVNTLASLQHPNLCKLLGFHARDGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSKPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVENLKMIQDLKYSCRFPLQEPAALSGREMSRSPSLNGIVCPAPRLSFSPSRPSVAPVPISPPRWSGVPVLPPRACSSTLSLEEFDRQESRKSSSSARRASVEGF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01399 544 PANTHER OS01G0822200 PROTEIN 45 543 - -
Car03g01399 544 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
Car03g01399 544 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Car03g01399 544 SUPERFAMILY Protein kinase-like (PK-like) 148 454 IPR011009 -
Car03g01399 544 MobiDBLite consensus disorder prediction 90 121 - -
Car03g01399 544 MobiDBLite consensus disorder prediction 24 51 - -
Car03g01399 544 PANTHER OS01G0588500 PROTEIN-RELATED 45 543 - -
Car03g01399 544 Pfam Protein tyrosine and serine/threonine kinase 183 444 IPR001245 GO:0004672|GO:0006468
Car03g01399 544 ProSiteProfiles Protein kinase domain profile. 169 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01399 544 MobiDBLite consensus disorder prediction 520 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01399 Car-Chr3 59265539 59269260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01399 148 448 Receptor kinase-like Gene Family AT4G02010 37.987 7.56e-58 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Car03g01399 PK_Tyr_Ser-Thr 7.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01399 - - gmx:100809117 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01399 03 59265539 59269260 Car03g01399 03 59265539 59269260 ECH
Car03g01399 03 59265539 59269260 Car06g02568 06 30610886 30615852 PCT