Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01394 ATGAGCTTCAGAGAAAGGAAGATAGAAGGAGAAGAGAGGGAATGTGAAAAATCAGTGAGGACAAATGGGTCTTTAACAACCACCACACACTTTACCATTGATGACAATCTTCTTGTTGACCCCAAATTGCTCTTTATTGGCTCGAAAATCGGTGAAGGAGCTCATGGAAAAGTTTATCAAGGAAGATATGTAGATCAAATTGTTGCTATCAAAGTTCTTCACCGTGGAAGTACGTCGGAAGAAAGAGCTTCCCTTGAAAATCGTTTTGCTCGGGAAGTTAATATGATGTCTCGTGTTCATCATAACAATCTTGTAAAGTTTATTGGAGCGTGTAAGGATCCTCTAATGGTGATAGTTACAGAGCTTTTGCCAGGGATGTCACTGCGAAAGTATTTGATGAGTATCCGTCCTAAACCATTAGACCTTCATCTGGCCATAAACTTTGCGCTTGATATTGCTCGAGCCATGGATTGGCTGCACGCTAACGGAATCATACATAGAGATTTGAAACCTGACAATCTTTTGCTTACAGCAAATCAGGAGTCCgtaaaacttgcagatttcggtcttgcaagagaagaatcagtgactgagatgatgactgccgaaacaggaacttaccgatggatggcaccagagTTGTACAGTACCGTAACATTGCGCCAGGGAGAGAAAAAGCACTATAACAACAAGGTTGATGTGTATAGCTTTGGGATTGTTTTGTGGGAGCTACTAACAAATCGCATGCCTTTTGAAGGAATGTCTAATTTACAAGCCGCTTATGCTGCTGCCTTCAAGCAAGAGAGGCCGAGAATTCCAGATGACATATCCCCCGATCTTGCTTTCGTCATACAATCATGCTGGGTTGAAGATCCTAACTTGAGACCAAGCTTTAGTCAAATCATCCGGATGCTCAATGCATTTCTCTTCACACTCTCGCCACAAAGTAGTAATGGTACCATTACCGAGTTTTCTGCCCGGAACAAAGGAAAGTTTGCTTTTCTTCGCCAATTGTTTTCTTTGAAAAGGTTAAAAAACTAA 1041 0.3756 MSFRERKIEGEERECEKSVRTNGSLTTTTHFTIDDNLLVDPKLLFIGSKIGEGAHGKVYQGRYVDQIVAIKVLHRGSTSEERASLENRFAREVNMMSRVHHNNLVKFIGACKDPLMVIVTELLPGMSLRKYLMSIRPKPLDLHLAINFALDIARAMDWLHANGIIHRDLKPDNLLLTANQESVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPRIPDDISPDLAFVIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPQSSNGTITEFSARNKGKFAFLRQLFSLKRLKN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01394 346 Gene3D Phosphorylase Kinase; domain 1 33 123 - -
Car03g01394 346 Gene3D Transferase(Phosphotransferase) domain 1 126 337 - -
Car03g01394 346 CDD STKc_MAP3K-like 50 305 - -
Car03g01394 346 ProSitePatterns Protein kinases ATP-binding region signature. 50 71 IPR017441 GO:0005524
Car03g01394 346 ProSiteProfiles Protein kinase domain profile. 44 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01394 346 PANTHER SERINE-THREONINE PROTEIN KINASE 1 318 - -
Car03g01394 346 Pfam Protein tyrosine and serine/threonine kinase 46 305 IPR001245 GO:0004672|GO:0006468
Car03g01394 346 MobiDBLite consensus disorder prediction 1 21 - -
Car03g01394 346 SUPERFAMILY Protein kinase-like (PK-like) 41 314 IPR011009 -
Car03g01394 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Car03g01394 346 SMART serkin_6 44 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01394 346 MobiDBLite consensus disorder prediction 1 19 - -
Car03g01394 346 PRINTS Tyrosine kinase catalytic domain signature 120 133 IPR001245 GO:0004672|GO:0006468
Car03g01394 346 PRINTS Tyrosine kinase catalytic domain signature 158 176 IPR001245 GO:0004672|GO:0006468
Car03g01394 346 PRINTS Tyrosine kinase catalytic domain signature 232 254 IPR001245 GO:0004672|GO:0006468
Car03g01394 346 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672|GO:0006468
Car03g01394 346 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01394 Car-Chr3 59219891 59223913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01394 32 343 MAP Kinase Kinase Kinase AT5G01850 73.851 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car03g01394 PK_Tyr_Ser-Thr 8.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01394 - - jre:109021493 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01394 03 59219891 59223913 Car03g01394 03 59219891 59223913 ECH