Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01392 ATGTATAAGGGAAGATTTTGCACTTCTGGTGGGATTAAGGCTTCCACTGGATATGTTGAAACTGATCCATCTGGTCGATATGGACGTttcagggacATTCTTGGCAGAGGAGCTATGAAAACAGTGTATAGAGCATTTGATGAGCTCCTTGGGATTGAAGTAGCTTGGAACCAAGTCAAACTTGGTGATGTATGTCACTCGCCAGAACAACTTGAACGCCTTTATTCAGAAGTTCATCTCCTTAAGCACCTTGACCATAAATCCATGATGATCTTCTATGGTTCTTGGATTGATGTCAATTGCAAAACCTTCAACTTCATCACTGAATTGTTCACTTCTGGCACCCTTAGAGAGTATAGGCAAAAATACAGGAAAGTAGATATTCGAGCATTGAAGAATTGGGCACACCAAATTCTAAGTGGTTTGGAGTATTTACACAACAATAATCCTCCTGTGATACATAGAGATCTCAAATGTGATAATATATTTGTTAATGGACATATGGGACAAATCAAGATTGGTGACTTGGGTCTTGCAGCTATACTTTGTAAATCCCAACTTGCTCAAAGTGTCATTGGTACACCGGAGTTCATGGCACCAGAACTATACGAAGAAAAATACAATGAGCTAGTAGATATATATTCATTTGGAATGTGTATGATAGAGATGCTTACTCTTGAGTTTCCATACAATGAGTGCACCAACCCTGCTCAAATATACAAAAAAGTTACTGCGGGAAAGCTACCAAATGCATTTTTCAGAGTCCAAGACTTAGAAGCCCAAAGGTTTGTGGGAAGATGTTTGGCACATGTATCAAAGAGACCATCAGCAAAGGAACTATTGTTGGACCCATTTTTAGCCATGGAACAACTTGAATTGTCATTGCTAAGCACAACATTATCTACTAATCAAACTCTAAAGATTAATTCCACCGAAGGAGTTGCCAATAAGCATCTTTCTACATATATGACAATCACTGGTTCCATAAATGAAGATGATAGCACACTTTTTCTTAAAGTTAGGATTTCTGATGAGACAGGGCAAACAAGGCATATATTCTTTCCATTTGACACAAAAAATGACACGTCTATTAAGGTGGCAATGGAGATGGTAGAAGAACTTGAAATTAGTCACTTAGAACCATTAGAGATTGCTACAATGATAGATAATGAGATATTAGCTTTATTTCCAAATTGGATGGGTACTACTCATGGCAAGGGTCCCTATCAACGACAACATAGCTTTAACTATGAAGAAGATGAGGATGTTAATATCCATAATCCTTTCCTCTTATCATCATCTTGTCCATCTTCCCCTCGTGATTCTCTCACCAAGACTCAATTTTGTGGGAAGCATGCCACATTTACTCAAGAATTGAATCAAGAACGTTTTATGAATGATGATGAAAGCTCTCCAAACTCAATGAACTCCTACAAGTGTTCCAAATTCCAATATTGTGAGGATGAGCATGGTCCAACAATAGTAGAAGAATGTAGAGCAAAAAATAACAAACTAAAATGCACAAGTTCAAGTCGTATGAAAGAGGGAGAAACAAGTAATTTTACCAAACATTTTTTGTCCGCAACAATGGACTCTTGTAGTGGTTGCATATGTGGTGGCCATGGGATGATAAGAATGAGTCATTCTAGCATGGAGGAGCGGAGGAGCTTGCAGCTTCAACGACCACAACACAAGAGACGAATGTTCAACACGGTTGGTGCTGTGGAGGGCATTGGATTTCATCCTCCATATAGATGTGGATGTTGTTCTCGTCGAGGTTTTATACAACATTGA 1794 0.3835 MYKGRFCTSGGIKASTGYVETDPSGRYGRFRDILGRGAMKTVYRAFDELLGIEVAWNQVKLGDVCHSPEQLERLYSEVHLLKHLDHKSMMIFYGSWIDVNCKTFNFITELFTSGTLREYRQKYRKVDIRALKNWAHQILSGLEYLHNNNPPVIHRDLKCDNIFVNGHMGQIKIGDLGLAAILCKSQLAQSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTLEFPYNECTNPAQIYKKVTAGKLPNAFFRVQDLEAQRFVGRCLAHVSKRPSAKELLLDPFLAMEQLELSLLSTTLSTNQTLKINSTEGVANKHLSTYMTITGSINEDDSTLFLKVRISDETGQTRHIFFPFDTKNDTSIKVAMEMVEELEISHLEPLEIATMIDNEILALFPNWMGTTHGKGPYQRQHSFNYEEDEDVNIHNPFLLSSSCPSSPRDSLTKTQFCGKHATFTQELNQERFMNDDESSPNSMNSYKCSKFQYCEDEHGPTIVEECRAKNNKLKCTSSSRMKEGETSNFTKHFLSATMDSCSGCICGGHGMIRMSHSSMEERRSLQLQRPQHKRRMFNTVGAVEGIGFHPPYRCGCCSRRGFIQH 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01392 597 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 583 - -
Car03g01392 597 Gene3D Transferase(Phosphotransferase) domain 1 111 292 - -
Car03g01392 597 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Car03g01392 597 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01392 597 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Car03g01392 597 PANTHER WNK KINASE 1 583 - -
Car03g01392 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Car03g01392 597 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01392 597 CDD STKc_WNK 26 286 - -
Car03g01392 597 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01392 Car-Chr3 59198630 59204159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01392 9 422 MAP Kinase Kinase Kinase AT3G51630 63.121 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car03g01392 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01392 K08867 - gmx:100272206 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01392 03 59198630 59204159 Car03g01392 03 59198630 59204159 ECH
Car03g01392 03 59198630 59204159 Car06g02925 06 47814108 47820358 PCT