Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01384 ATGTTACAGAAGGGAAGTGTGCTTATGCAAAGATATGAGCTGGGAAGATTATTAGGCCAAGGAACTTTTGCAAAGGTCTACCATGCTAGGAATCTGATAAGTGGCATGAGTGTGGCCATTAAGGTAGTTGATAAAGAAAAGATTTTGAAAGTCGGGATGATTGATCAGATTAAGCGCGAAATTTCGGTGATGAGATTAGTCAGACACCCAAATGTGGTTGAGCTTTACGAGGTAATGGCCAGTAAAACCAAAATTTTCATTGTCATGGAGTATGCAAAAGGTGGTGAGCTCTTCAACAAGATAGCTAAAGGAAAGCTCAAGGTGGATGTTGCTAGACGATATTTTCAGCAGTTGGTTAGCGCAGTTGACTTCTGCCACAGCAGGGGGGTGTATCATAGAGATTTGAAACCCGAAAATCTACTATTGGATGAAAATGAGAATTTGAAGATTTCAGATTTTGGGTTGAGTACCTTTGTTGAATCTAATTGCAAAGATGGATTACTCCATACTACATGCGGTACCCCTGCGTATGTTTCCCCGGAAGTGATAAACAGAAAGGGTTATGATGGAAGCAAAGCTGATATATGGTCATGTGGTGTAATCTTGTTTGTTCTATTGGCTGGTTATCTTCCATTCCATGATCAAAATCTGATGGAGATGTACAGGAAAATCAGTAGAGGGGAATTCAAATTTCCTAAATGGTTTGCACCAGAGGTTCGCCGGTTGTTGTCCAAAATATTAGATCCATATCCCAAGACTCGGATATCAATGGCCAAGATCATGGAAAATTCTTGGTTTAAAAAGGGATTAGAGAAGCCTGTTGTTATTGAGACCGAAAACAATGAACCAGCTTCTTTGCTGCATGCTGATGGAGTGTTCGAAGTGTCCGAGAACGGTGATGGTTCTATTGCGGAGACAAAACAACAACAAGCAAAGCCTTGCAACAACTTAAATGCCTTTGATATCATCTCCTTCTCGTCCGGTTTCGATTTATCTGGTTTGTTCGAGGACAAAATTCAACAGAAAGAGATGCGGTTTACATCTAACAAGCCGGCCTCAACTATAATCTCGAAGTTGGAAGAAATTTGCAAGTGTCTTTGCTTGAAAGTAAAGAAAAAAGATGGAGGTTTGTTCAAGTTGGAAGGTTCAAAGGAAGGAAGGAAAGGAACTCTAAATATTGATGCCGAAATTTTCGAGATTACCCCTATCTTTCATCTTGTGGAACTTAAAAAGTCCAATGGGGATACAATGGAGTTTCAGAAGCTTTTGCAAGAGGACATTAGACCAGCACTTAAGGACATTGTGTGGAGCTGGCAAGGAGAAGAACCACAGCAACTTCAACATGAAGTAGTGCAGGAGGAGCAACAGCCATCTCTTACTTCTCAAATTTGA 1392 0.4059 MLQKGSVLMQRYELGRLLGQGTFAKVYHARNLISGMSVAIKVVDKEKILKVGMIDQIKREISVMRLVRHPNVVELYEVMASKTKIFIVMEYAKGGELFNKIAKGKLKVDVARRYFQQLVSAVDFCHSRGVYHRDLKPENLLLDENENLKISDFGLSTFVESNCKDGLLHTTCGTPAYVSPEVINRKGYDGSKADIWSCGVILFVLLAGYLPFHDQNLMEMYRKISRGEFKFPKWFAPEVRRLLSKILDPYPKTRISMAKIMENSWFKKGLEKPVVIETENNEPASLLHADGVFEVSENGDGSIAETKQQQAKPCNNLNAFDIISFSSGFDLSGLFEDKIQQKEMRFTSNKPASTIISKLEEICKCLCLKVKKKDGGLFKLEGSKEGRKGTLNIDAEIFEITPIFHLVELKKSNGDTMEFQKLLQEDIRPALKDIVWSWQGEEPQQLQHEVVQEEQQPSLTSQI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01384 463 PANTHER - 3 448 - -
Car03g01384 463 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01384 463 SUPERFAMILY Protein kinase-like (PK-like) 8 288 IPR011009 -
Car03g01384 463 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Car03g01384 463 Pfam NAF domain 315 372 IPR004041 GO:0007165
Car03g01384 463 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01384 463 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01384 463 Gene3D Kinase associated domain 1, KA1 312 437 - -
Car03g01384 463 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Car03g01384 463 CDD CIPK_C 318 432 - -
Car03g01384 463 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 3 448 - -
Car03g01384 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Car03g01384 463 CDD STKc_SnRK3 11 265 - -
Car03g01384 463 Gene3D Transferase(Phosphotransferase) domain 1 92 292 - -
Car03g01384 463 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01384 Car-Chr3 59078340 59083105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01384 1 444 CBL-interacting serine-threonine protein kinases AT5G58380 64.978 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car03g01384 Pkinase 2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01384 K07198 - gmx:100811923 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01384 03 59078340 59083105 Car05g01525 05 59637063 59639352 ECH
Car03g01384 03 59078340 59083105 Car03g01384 03 59078340 59083105 ECH
Car03g01384 03 59078340 59083105 Car05g01362 05 57559183 57561772 ECH
Car03g01384 03 59078340 59083105 Car02g01433 02 41179670 41181957 ECH