LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car03g01379	ATGGCTAAAATTATTCCAATTTTCACATATTGTTTTATGTTATGGTTTGTTGTTGGGATAGTAACAGCCCAATTGTCCTCTGATTTTTACGCAACAACGTGTCCTGATGTACTTTCAACCATTAAGACACAAATTGATTTGGCTGTGAATgatgagcctcgcatgggtgcatcacttcttcgtctccattttcacgattgctttgttcaagcaagttccacttcttccatcttttttatttttggatgtgatggatcagtattgctagacgatacatcaagtttcacaggtgaaaaatcagctggtccaaatgctaattccttaaggggttttgatgtaattgacactataaagagtgaagtggagagtttatgccccaatgttgtctcatgtgctgatattctctctgtggctgcaagagactctgttgtcgcattaggtggacctagttggacagtgcaattggggagaagggattcaaccacagcaagtttggattctgcaaacacaaatttacctggacctacttcggatctaactaatctaatcactgcttttgataaaaaaggtttcacaacccaagaaatggttgctctatcagATGTTTTAGGATCTCACACAATTGGTCAAGCCAGCTGTAGATTTTTCAGATCAAGGATATACAATGAAGACAACATAGATCCAACATTTGCAGCATCATTGCAAGCAAATTGTCCTACATCAGGTGGTGATAACAATTTGTCTCCACTTGACACAACTACTCCAGACACATTTGACAATTCTTACTACACAAACTTGCAAAGCCAAATGGGTCTCTTCCACTCTGATCAAGAACTTTTCAATCAAGGATCCACAGATTCTATTGTAGATGGTTATAGTAGTGACCCTTCAAGTTTTGAAACTGATTTTGCTAATGCAATGCTTAAAATGGGGAACCTTAGTCCACTTACTGGCTCTAGTGGTCAGATTAGGACCACCTGCGGGGCAATAAACTAA	996	0.2068	MAKIIPIFTYCFMLWFVVGIVTAQLSSDFYATTCPDVLSTIKTQIDLAVNDEPRMGASLLRLHFHDCFVQASSTSSIFFIFGCDGSVLLDDTSSFTGEKSAGPNANSLRGFDVIDTIKSEVESLCPNVVSCADILSVAARDSVVALGGPSWTVQLGRRDSTTASLDSANTNLPGPTSDLTNLITAFDKKGFTTQEMVALSDVLGSHTIGQASCRFFRSRIYNEDNIDPTFAASLQANCPTSGGDNNLSPLDTTTPDTFDNSYYTNLQSQMGLFHSDQELFNQGSTDSIVDGYSSDPSSFETDFANAMLKMGNLSPLTGSSGQIRTTCGAIN	331

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Car03g01379	331	PANTHER	PEROXIDASE	16	331	-	-
Car03g01379	331	SUPERFAMILY	Heme-dependent peroxidases	24	331	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	ProSitePatterns	Peroxidases active site signature.	56	67	IPR019794	GO:0004601
Car03g01379	331	Gene3D	Peroxidase, domain 2	173	310	-	-
Car03g01379	331	PRINTS	Haem peroxidase superfamily signature	56	70	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Haem peroxidase superfamily signature	198	213	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Haem peroxidase superfamily signature	251	266	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PANTHER	PEROXIDASE 72-RELATED	16	331	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	128	138	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	197	209	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	109	122	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	58	78	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	265	282	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	34	53	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	249	264	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	305	318	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	PRINTS	Plant peroxidase signature	147	162	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	ProSiteProfiles	Plant heme peroxidase family profile.	24	331	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	CDD	secretory_peroxidase	24	330	IPR033905	GO:0004601\|GO:0042744
Car03g01379	331	Pfam	Peroxidase	43	295	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Car03g01379	331	Gene3D	-	28	327	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car03g01379	Car-Chr3	59005446	59013594	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car03g01379	20	331	Peroxidase	AT5G05340	61.146	2.19e-140	398

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car03g01379	K00430		-	gmx:100815142	464.151

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car03g01379	03	59005446	59013594	Car03g01379	03	59005446	59013594	ECH