Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01344 ATGGGTGGCTGTTGTAGCCACGAAGTTTCTGTTCGAGGCAGAGTGGAAAGTGAGGTGGATGATGGAGAATATGATGATAATGAGAATAATATTGAGGATGTCACGTATCAAAATGATGGAGCAATGGTTAGGTTAAGAGGATCATCTAAGTATGTATCAATGTATACCCAACAGGGTAGAAAAGGTATTAATCAAGATTCAATGACAGTTTGGGAGGACTATACTGGACAACATGACATGATCTTATGCGGCGTGTTTGATGGTCATGGTCCTCTAGGCCACAAAGTTTCGCAATTTATTCGCGACAATCTACCATTGAAACTGTCTGCAGCAATCAAAATGGCACAACAGAAGGCCAACAGATACTATGAGGCTAATAATGCAGACTTGGAGACATTTGATGGTGTCCGCAATGATAATAACCTCCGCAACATATCCCTCGCTTCGTGGGAAGGATGTTTTCTGAAATCCTTCGATGAAATGGATGAATATCTTGCTCAGGAAATCAACACTGATAGCTATTGCAGTGGTTGCACAGCTGTAACTTTAATTAAACAGGGTGACCAGTTGATAGTCGGTAATTTGGGCGATTCTCGTGCAATTCTTTGCACAAGGGATAGAGACCAACTTATACCTGTTCAACTTACCGTTGACTTGAAACCGGATATTCCAAGTGAAGCTTCAAGAATCTTTAACTGTGAAGGCAGGGTTTTCGCCGCAGAAGAAGAACCAGATGTATACAGAATATGGATGCCTGATGATGACTGTCCTGGACTAGCTATGTCAAGAGCCTTTGGTGACTTTTGCCTAAAAGATTATGGCCTCATTGCAGCTCCAGATGTATTTTATAGAAAAGTTACCAAGCAAGATGAATTTGTTGTTTTGGCATCTGATGGGATATGGGATGTGCTTACAAACAATGAAGTAATAAACATAGTTGCTTCGGCGCCAAGAAAGTCCATAGCAGCAAAATTGTTGGTGAAGCGTGCCGTTCGAGCATGGAAGTACAAGTATCCAGGATCAAAGGTTGATGATTGTGCAGTCATATGCTTGTTTCTAGATGACCAACCTGTTTTGTCACATTCTCAATCGAGTACGAGTAGAAAAAGTCGACATCGCAGCAGGCACTCACATCGCTCCAAATCACAGAGAAACGAAGACAATGAAACTGTGGCTGGAAAAGTTGGAGTAGAATTGAATGAAGAATGGAAAGCTCTTGGAGGGTTAGCTAGAGCAAATTCAATATCAAAACTTCCAAGGGTTGCTAGGAATATGAGTAAAAGACAATCATCTAAGCACCATATTGGAAGTTGA 1314 0.4132 MGGCCSHEVSVRGRVESEVDDGEYDDNENNIEDVTYQNDGAMVRLRGSSKYVSMYTQQGRKGINQDSMTVWEDYTGQHDMILCGVFDGHGPLGHKVSQFIRDNLPLKLSAAIKMAQQKANRYYEANNADLETFDGVRNDNNLRNISLASWEGCFLKSFDEMDEYLAQEINTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAILCTRDRDQLIPVQLTVDLKPDIPSEASRIFNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIAAPDVFYRKVTKQDEFVVLASDGIWDVLTNNEVINIVASAPRKSIAAKLLVKRAVRAWKYKYPGSKVDDCAVICLFLDDQPVLSHSQSSTSRKSRHRSRHSHRSKSQRNEDNETVAGKVGVELNEEWKALGGLARANSISKLPRVARNMSKRQSSKHHIGS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01344 437 Gene3D - 38 355 IPR036457 -
Car03g01344 437 ProSiteProfiles PPM-type phosphatase domain profile. 51 353 IPR001932 -
Car03g01344 437 CDD PP2Cc 51 353 IPR001932 -
Car03g01344 437 MobiDBLite consensus disorder prediction 361 392 - -
Car03g01344 437 SUPERFAMILY PP2C-like 45 355 IPR036457 -
Car03g01344 437 PANTHER ALPHABET, ISOFORM E-RELATED 1 413 - -
Car03g01344 437 Pfam Protein phosphatase 2C 124 331 IPR001932 -
Car03g01344 437 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 413 - -
Car03g01344 437 MobiDBLite consensus disorder prediction 418 437 - -
Car03g01344 437 SMART PP2C_4 42 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01344 Car-Chr3 58422977 58426271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01344 1 386 PP2C-type Phosphatase Gene Family AT5G01700 51.163 7.59e-135 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01344 - - mtr:MTR_7g070510 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01344 03 58422977 58426271 Car03g01344 03 58422977 58426271 ECH
Car03g01344 03 58422977 58426271 Car06g02441 06 27043047 27045502 PCT