Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01333 ATGGGTAagaagcagaagcagaagcagcagcagaagATTGTTCTTCCGCCGGACCTCCCGCCGGAGATTCCAGACGACGAAGTCGAGGTTTCCGACGACGATCTCCGATTCGTCAACGAAAATCGTGCCTATGCTTCCTTGCTTTCCACCTTGGACACTCAATCAATTACCAAGCATGTTACACGGGTTGCTGATGCCAAAGACGATGCTTTGGAGAAACTGTATGAGCAACGGATGCAGAAGAATGCTCTCAAGAAAGAAAAAGAAGAAACAGGTCTGCAGGTTGATCGAGTAGATGCTCTTCCAGTCAAGACTTTAGATGGAAAAGTCTATTACCGGACAGCTACCAAGTCGGTTGCACTAAATGGTCCAACTGAAGAGGAAACTGGAGAGGATGGCAATGCAGACACAGAAGAAGGGGAAGAACCACCACAGGCAGCAGTTTTGGCTGAGGTTAAAGATGATCTTAAAGCTGAGGAGGCATTTGAAAGTAAAAAGTCTAAACTTGCAGAGTTGGGAAATGCCTTGCTAACAGACCCAGAGTCCAATATTAAATTTCTGAAGGAGTTGGTACAAATATCTAAAGATAATGATCAAACAATTGTGAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAGAGATATTATACCTGGCTATCGAATCAGGCTTCCTACTGAAAAGGAATTAGAAATGAAGGTTTCAAAGACTGTTAAAAAGATGCGTTTTTATGAATCAACTCTCCTCTCTGCTTACAAGGCTTACTTGCAAAGGCTGATAGCCTTAGAAAAGCAGCCTTTATTTCAGCTTGTCGCAATTCGTTGTATTTGTTCTTTGCTTGATTCAAATCCCCATTTCAACTTTCATGAAACCTTGTTGGATGCAACTGTCAGAAACATAAGCTCCAGTAATGAGGCCATAAGGAAACTTTGTTGTTCCACAATTAAGTCACTCTTCACAAATGAGGGTAAACATGGTGGCGAAGTTACTGTGGAGGCTGTGCGGTTGATTTCTTTTCAGGTTAAAGATCATAATTGCCAGTTGCACCCTGATTCGATTGAGGTTTTCTTGTCTCTTTCATTTGATGAGGATCTTGGGAAGTCTGAAAAGATGGACAAGGATCAGAAATTTAAAAACAAGAAAGGTATGAAAAGAAAACACATGGAGGCATCAAATCAATTGCCGGAAAATGACAGAAAGAAAAGTAGGCAAGAGTCGATTTCTAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCTTCCTTTACCATGGATGTCATGGAGAAGAGACAAATGCAAACACAAACACTCTCTGCTGTATTTGAGACATACTTTCGCATTTTGAAGCATACGCTGCAGTCGTTAGCTGCCAGGCCTGAAGCAAACCCTGGGACATTATCTGCTGCAGTGGGAGTGGAACCCCACCCATTGCTTGATCCATGTCTGAAAGGACTGGCAAAATTCTCGCACCTGCTTGACCTTGATTTCCTTGGGGATTTAATGAAGCATTTGAAAATACTTGCTTCTGGAAATAGTAACTCAGGGAACACATCTGAGAAGTGTCCTAAATGTCTGACCGTATCTGAACGCCTCCAATGTTGCATTGTTGCTTTTAAAGTGATGAGAACCAATCTTGATGCTTTGAACGTTGATTTACAGGACTTCACTGTCCATCTTTACAATCTCTTACTTGAATACAGGCCTGGAAGGGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGCGACGATAGGCAGCATGACATGCAAAAAACTGCTGCATTTATAAAACGTTTGGCTACATATTCACTGTGTGTTGGATCTGCAGATTCCATGGCTGCCTTGGTCACAGTAAAGCATCTTATTCTGAAGAATGTCAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGGGGATCTGTTTCTGGGTCAATTTCAAAATATCTACCATATTCGACAGATCCTAATTTAAGCGGTGCCCTTGCCTCGGTTCTTTGGGAACTCAGTCTTTTGTCGAAACACTATCACCCAGCCATATCAACAATGGCGTCGGGCATTTCAAGCATGAGCGGCGAACACAACCAAGTCTTCCTCTCCAAGTCCTCTCCTCAACAAGCTTTCAAGGACATGTCTCTGGACCAAGAACTATGTTTTGAACAAAGTGACGGTATAAAATTAAAAAACAAGAAGCGACAATCAAACAGCAAAGCTACATCAAATTCCATTGGTTCTACAACAGTAACGAGTTCCTTTGACGAGGATGATTTGCGTAGGAAACTTAGTTCCCATTTTACGGTTCTTCATGATATCAAGGAGAATGAAAGGTTGAGAAGTAAGTTGGATTCGACTGCACAATCACTTCAGCTATATGAACAATATAAGAAACAAAAGAAGCAACGATCAAAACCAAGCCGATGA 2430 0.414 MGKKQKQKQQQKIVLPPDLPPEIPDDEVEVSDDDLRFVNENRAYASLLSTLDTQSITKHVTRVADAKDDALEKLYEQRMQKNALKKEKEETGLQVDRVDALPVKTLDGKVYYRTATKSVALNGPTEEETGEDGNADTEEGEEPPQAAVLAEVKDDLKAEEAFESKKSKLAELGNALLTDPESNIKFLKELVQISKDNDQTIVKLGLLSLLAVFRDIIPGYRIRLPTEKELEMKVSKTVKKMRFYESTLLSAYKAYLQRLIALEKQPLFQLVAIRCICSLLDSNPHFNFHETLLDATVRNISSSNEAIRKLCCSTIKSLFTNEGKHGGEVTVEAVRLISFQVKDHNCQLHPDSIEVFLSLSFDEDLGKSEKMDKDQKFKNKKGMKRKHMEASNQLPENDRKKSRQESISKTREEVEADYKAASFTMDVMEKRQMQTQTLSAVFETYFRILKHTLQSLAARPEANPGTLSAAVGVEPHPLLDPCLKGLAKFSHLLDLDFLGDLMKHLKILASGNSNSGNTSEKCPKCLTVSERLQCCIVAFKVMRTNLDALNVDLQDFTVHLYNLLLEYRPGRDQGEVLAEALKIMLCDDRQHDMQKTAAFIKRLATYSLCVGSADSMAALVTVKHLILKNVKCRNLLENDTGGGSVSGSISKYLPYSTDPNLSGALASVLWELSLLSKHYHPAISTMASGISSMSGEHNQVFLSKSSPQQAFKDMSLDQELCFEQSDGIKLKNKKRQSNSKATSNSIGSTTVTSSFDEDDLRRKLSSHFTVLHDIKENERLRSKLDSTAQSLQLYEQYKKQKKQRSKPSR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01333 809 MobiDBLite consensus disorder prediction 1 24 - -
Car03g01333 809 MobiDBLite consensus disorder prediction 119 144 - -
Car03g01333 809 Coils Coil 67 91 - -
Car03g01333 809 MobiDBLite consensus disorder prediction 370 413 - -
Car03g01333 809 MobiDBLite consensus disorder prediction 386 413 - -
Car03g01333 809 Pfam CBF/Mak21 family 532 687 IPR005612 -
Car03g01333 809 MobiDBLite consensus disorder prediction 731 752 - -
Car03g01333 809 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 6 751 IPR016903 -
Car03g01333 809 Pfam Nucleolar complex-associated protein 165 255 IPR011501 -
Car03g01333 809 MobiDBLite consensus disorder prediction 737 752 - -
Car03g01333 809 PIRSF Noc3 2 788 IPR016903 -
Car03g01333 809 SUPERFAMILY ARM repeat 178 366 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01333 6 784 Core DNA Replication Machinery Family AT1G79150 56.704 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01333 K14834 - gmx:100776136 1221.07