Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01328 ATGCCCGTTACTCTATTCTTCTTCATTTTTCTTTTCTTTTTCCATCCCGTCGTTTCTCTCTCCTCCGACGGCCTCGCTCTTCTAACTCTTAAATCCGCCGTCGACGGCGACGGCGCAACCGCATTTTCCGACTGGAACGAAAACGACCCCACGCCGTGCCACTGGTCCGGCATAAGCTGTGCAAACATCTCCGACGATACGGACCCTCGCGTCGTCGGAGTTGGTCTCGCCGCCAAAGGCCTCCGTGGTTACCTCCCGTCGGAGCTCGGAAACTTAGTCTATCTCCGTCGCCTGAACCTCCACACCAATGCCTTCCATGGTTCCATTCCCGTTCAGCTCTTCAATGCCACTTCCCTTCACAGCATATTCCTCCACGGTAACAATCTCTCCGGTAGCCTCTCTCCCTCCGTCTGCAACCTCCCACGCCTCCAAAATCTCGACCTCTCCGATAACTCCCTCGCCGGAACCATCCCGGAGTCCCTCGGAGACTGTTCCCAGCTCCAGCGCCTTATTCTCGCACATAACAAATTTTCCGGCGACATTCCGCCGACTCCATGGCCGAAGCTAAAAAACCTCGTTCAACTCGACCTCTCCGCGAATCTTCTACAAGGTTCGATTCCAGACCAAATCGGCGAACTAAACTCCCTCGCCGGAACCCTAAACCTCTCATTCAACCACCTATCAGGTAAAATCCCAAAGTCTCTAGGAAAATTACCGGTGACCGTTAGCTTCGATCTTCGGAACAACGATCTAAGCGGCGAAATTCCTCAAACTGGGTCGTTTTCGAATCAGGGACCCACCGCGTTTCTCAACAATGCGAAACTCTGTGGGTTTCCTCTACAAAAAACATGTACCGGTTCAGCGCAGAGTGAACCGGGAAAAAATCCCGGTTCAGCTCGACAACGCGTGAACCGGTCTAAAAAAGGGTTGAGTCCCGGTTTAATCATTCTTATATCGGTAGCTGATGCTGCTGGTGTGGCTTTAATTGGGCTTGTTATTGTGTATGTGTATTGGAAGAAGAAAGATAATTCAAATGGGTGTAGTTGTAGTAGGAAGAGAAAATTTGGTGGTAGTGGAAACAATGAAAGATCAAATTTGTGTTGTTTTTGTTGGTCTTTAGGGTGTGTTAAAGGGTTTAAAAGTGATGATTCTGATATggaagagagtgagaaaggtggtggaggaggagaaggtggtggaagaggggaaggtgaaggTGAATTGGTGGCAATTGATAAAGGTTTTAGCTTTGAACTTGATGAATTGTTGAGAGCTTCTGCATATGTGTTAGGGAAAAGTGGGTTAGGGATTGTGTATAAGGTGGTACTTGGAAATGGTGTTCCTGTGGCTGTGAGGAGATTAGGGGAAGGTGGTGAACAAAGGTATAAGGAGTTTGCTGCTGAGGTTCAAGCTATTGGCAAAGTGAAACACCCTAATATTGTGAAGTTGAGAGCTTATTACTGGGCTCAAGATGAGAAGCTTTTGATTAGTGATTTCATCTCAAATGGCAATTTGGCTAATGCTCTTAGAGGGAGAAATGGGCAACCATCTCCAAATCTTTCATGGTCAACCAGGCTGAAAATAGCCAAAGGAACAGCCAGAGGTTTAGCTTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGTGACATCAAACCCTCCAATATCCTTCTTGACACAAACTTCCAACCCCTCATTTCTGATTTCGGTCTTAACCGGCTGATCAGCATCACCGGCAACAATCCCTCCACCGGCGGTTTTATGGGCGGAGCTCTTCCTTACTTTAAGTCATCACAAACCGAGCGAATCAACAACTATAAAGCTCCTGAAGCCAAAGTACCAGGATGCAGACCCACCCAAAAGTGGGACGTCTATTCGTTTGGAGTTGTGTTACTCGAACTGCTCACTGGGAAATCCCCAGATTCTTCTCCAGGAGCATCAACTTCCGTGGAAGTACCTGATTTGGTAAGGTGGGTAAAGAAAGGGTTTGAACAAGAAAGCCCTTTATCTGAAATGGTTGATCCATCACTTCTTCAAGAAATTCATGCCAAGAAAGAAGTTCTAGCTGTGTTCCATGTAGCACTATCATGCACTGAGGGAGACCCTGAGGTCAGGCCTAGAATGAAAACTGTCTCTGAAAATCTCGAAAAAATTGGATCATAA 2166 0.4552 MPVTLFFFIFLFFFHPVVSLSSDGLALLTLKSAVDGDGATAFSDWNENDPTPCHWSGISCANISDDTDPRVVGVGLAAKGLRGYLPSELGNLVYLRRLNLHTNAFHGSIPVQLFNATSLHSIFLHGNNLSGSLSPSVCNLPRLQNLDLSDNSLAGTIPESLGDCSQLQRLILAHNKFSGDIPPTPWPKLKNLVQLDLSANLLQGSIPDQIGELNSLAGTLNLSFNHLSGKIPKSLGKLPVTVSFDLRNNDLSGEIPQTGSFSNQGPTAFLNNAKLCGFPLQKTCTGSAQSEPGKNPGSARQRVNRSKKGLSPGLIILISVADAAGVALIGLVIVYVYWKKKDNSNGCSCSRKRKFGGSGNNERSNLCCFCWSLGCVKGFKSDDSDMEESEKGGGGGEGGGRGEGEGELVAIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAQDEKLLISDFISNGNLANALRGRNGQPSPNLSWSTRLKIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDTNFQPLISDFGLNRLISITGNNPSTGGFMGGALPYFKSSQTERINNYKAPEAKVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSPGASTSVEVPDLVRWVKKGFEQESPLSEMVDPSLLQEIHAKKEVLAVFHVALSCTEGDPEVRPRMKTVSENLEKIGS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01328 721 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Car03g01328 721 SUPERFAMILY Protein kinase-like (PK-like) 429 716 IPR011009 -
Car03g01328 721 SUPERFAMILY L domain-like 22 281 - -
Car03g01328 721 ProSiteProfiles Protein kinase domain profile. 424 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01328 721 SMART LRR_typ_2 189 213 IPR003591 -
Car03g01328 721 SMART LRR_typ_2 92 116 IPR003591 -
Car03g01328 721 SMART LRR_typ_2 140 164 IPR003591 -
Car03g01328 721 Gene3D Transferase(Phosphotransferase) domain 1 500 721 - -
Car03g01328 721 PRINTS Leucine-rich repeat signature 143 156 - -
Car03g01328 721 PRINTS Leucine-rich repeat signature 189 202 - -
Car03g01328 721 MobiDBLite consensus disorder prediction 285 305 - -
Car03g01328 721 Gene3D Phosphorylase Kinase; domain 1 407 499 - -
Car03g01328 721 Pfam Protein kinase domain 429 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01328 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Car03g01328 721 CDD STKc_IRAK 430 719 - -
Car03g01328 721 Gene3D Ribonuclease Inhibitor 20 184 IPR032675 -
Car03g01328 721 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 720 - -
Car03g01328 721 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 6 720 - -
Car03g01328 721 Gene3D Ribonuclease Inhibitor 185 286 IPR032675 -
Car03g01328 721 SMART serkin_6 428 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car03g01328 721 MobiDBLite consensus disorder prediction 381 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01328 Car-Chr3 58206916 58211842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01328 16 719 Receptor kinase-like Gene Family AT1G67510 70.515 0.0 996
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car03g01328 Pkinase 4.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01328 - - gmx:100795021 1164.06