Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01315 ATGTATCAGCCAGAGATTCTTCAATCTCCCTGGCTATTCTATGAAGACATAGACtcatcatcaacttttgatcatcatcatcatcaAATTATTCATGAGTCCTATGGCTTTACAAACCatgttgatgactatgatccatcatatggcatcatcatagatgaccatgttgatgatgatgGATTCAATACTCTATTGACCACTTCAGAAAATAGTACTTCAACCATATTCACCAATGATCATATCCAATTTGAATTTGATGAACAAACCTTTCAACTTCCATCACTCATGGATTTAGATCCTTTTGATTCCATTTTAACTCCTCAAATTGATGATTCTATTTTTCATGATCATGGTTACCAACAAGAAAGTGAAAGTAGCTTCCTTTCACAAAATTTTCCTAGTGATCATGCATCATGGAGTCCAAGTTCAACAATTTCAATGAAATCACAATTTTCCTCAAATCAACCATCACTAAACTTGCCACAACAAAACATGGAAATTGAAAACCATGTGAGTCTTCCACACTTAATGGAAGCACATGGAGAAGCCTTAGAACAAGGACAAAAACAACTAGCTGAAATTATCTTGAAGTGTATAAGCCAAAAAGTTACTTCTCCACTTGGTGAATCCCTTGAAACTCTTGCATTTTATTTATCTCAACATGTTACAAAACATGTTGATTATCTTAAAGGTGAGGCCTATAAAAACTTTGAAGCTTGTTTCAAAGCACTTTATCAAGGGAATCTAGTTGGAAAAGTTGCTCACTTTGCATCTATTTCTTCAATTCTTGAGGCTGCCATGTTAGAAGATTGTGATGTTATACATGTGATTGATTTTTGTATTGGAAATGGAATTCAATGGCCTTTTTTATTGGAGGCTGTTTCAAAGATGAACAAAACATTGAAATTGACATCAATTAAATGGTGTGATGATGAAAGTTTTGAAAAAAGTCAATGGAATTTTGATGATACAAAAAGGAACCTTTATGAGCAAGCTAAATCATGTGGTTTGAAATTGAAGGTTGAGGAGAAGGGGTTGGAGGAATTGGTTTTTGAGATCAAAAGAATAAACAAAAGGGGTTTGAAAAAAGAGTTTTTGGCTTTCAATTTGATGATTGGTCTACCTCATATGAGAATGGTAAGAAACAAAAGAAAAAATGGTTTGATGTTTTTGAAGGTAGCTAAGGATTTAATAAAAAACTTTGGAATCAAGGGAATGATTACTTTTGGTGATGGTGATGCATTTGAGAAACTTAAAAATTGTTTGAATTTTAAGTCATTTTTTGAAGGGAATTTGGTTCATTACAAGGCTTTGTTGGAATCAATTGAGTCACAATTTTCAGCTCAATTTTTAGAAGCTAGAACTGCTTGTGAAGTGTTGTTTGTGGCACCTTGTGTTTCTTCTCTTGATTGGTTGAAAACATGGGAAGAGATGAAAAGTGACTGTGAAATTGAAGATGAGATTGGATTAGAGGGTAGTGGATTGAGCAAAAATGTTTTGATGGAAGTTGGAGAAGTTTTGAGAGGAAGTGAAAGTTCATATGAGATAAGAAATGAAGGGCAAAATGTCAATCAACTTGTTTTGGAATGGAAAGGAACTCAACTATTAAGATTTTCCATTTGGAAAAACTAA 1632 0.3156 MYQPEILQSPWLFYEDIDSSSTFDHHHHQIIHESYGFTNHVDDYDPSYGIIIDDHVDDDGFNTLLTTSENSTSTIFTNDHIQFEFDEQTFQLPSLMDLDPFDSILTPQIDDSIFHDHGYQQESESSFLSQNFPSDHASWSPSSTISMKSQFSSNQPSLNLPQQNMEIENHVSLPHLMEAHGEALEQGQKQLAEIILKCISQKVTSPLGESLETLAFYLSQHVTKHVDYLKGEAYKNFEACFKALYQGNLVGKVAHFASISSILEAAMLEDCDVIHVIDFCIGNGIQWPFLLEAVSKMNKTLKLTSIKWCDDESFEKSQWNFDDTKRNLYEQAKSCGLKLKVEEKGLEELVFEIKRINKRGLKKEFLAFNLMIGLPHMRMVRNKRKNGLMFLKVAKDLIKNFGIKGMITFGDGDAFEKLKNCLNFKSFFEGNLVHYKALLESIESQFSAQFLEARTACEVLFVAPCVSSLDWLKTWEEMKSDCEIEDEIGLEGSGLSKNVLMEVGEVLRGSESSYEIRNEGQNVNQLVLEWKGTQLLRFSIWKN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01315 543 Pfam GRAS domain family 179 542 IPR005202 -
Car03g01315 543 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 23 542 - -
Car03g01315 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 542 IPR005202 -
Car03g01315 543 MobiDBLite consensus disorder prediction 139 160 - -
Car03g01315 543 ProSiteProfiles GRAS family profile. 164 542 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01315 Car-Chr3 58072161 58074123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01315 168 306 GRAS Transcription Factor Family AT2G01570 30.612 3.55e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car03g01315 GRAS 1.9e-26 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01315 - - mtr:MTR_7g069740 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01315 03 58072161 58074123 Car03g01315 03 58072161 58074123 ECH