Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01311 ATGGAGGATATGAGGGAAGAAAAAACATATGGGTCAGAATGTTCGAAGACAAGTGTTTCAAATGAAGTAGATGGTTGTGAAATTAGTGAAGAAAATCATGAAGATGAAGAAAGTAAGCAAAACAACATTAATGAAGGATTAAGCTCAAGCAATAGTACTATAGAAGAAAATAATGAGAAGAAATCATCAGTGAGACCTTATGTTAGATCCAAGTTTCCTAGGCTACGTTGGACCCCTGATCTTCACCTTCGCTTCATTCATGCTGTTCAAAGACTTGGTGGACAAGAGAGAGCAACTCCAAAATTGGTTCTTCAGTTGATGAATATAAAAGGTTTGAGTATTGCTCATGTGAAGAGTCATTTACAGATGTATAGAAGCAAGAAAGTAGTTGACACAAATCAAGTTTTGGCTGATCATAGGCTTCTTGTAGACAATGGAGACAAAAATGTTTATAATCTCAGCCAACTTCCTATGCTTCAAGGCTATACTCCAAACCAAAGTTCATCATATAGATGTGGATATGAGCCAATAATGATGGAGAGAAGCAATAATCACATGGTGAATATGGATCATAGTATTTTCCAAGTGGACTCTTCACATTTTAGAGAACAATCATCAAGAAGTAAAGTCCATGAACCAAATGACAATTTCCTCTCATTTTGTGGCCATGATCTTCAAGATCATCCAAGAGCACAAGACCTCATGCTTAAAGATAATTTGCTTGCAAATCAAGTGGAACCAAATACATTGAAAAGAAAAGCTTCAGATGTGGAAGTTGATTTGGATCTATCACTTAAATTAAATTCAAGGAATTACCAAGGAAATATAGAGGAACATGAAGTTGATAGCAAATTATCACTCTCTTTGTATTCTCAATCTTCATCATCTTATCTTGGCAGTAAAATGAAAGAAAAAGATGTTTCTAAGGAGCAAGGGAAAATTAGAGGCAATAATATTGTTTTGGATCTAACCATATAA 978 0.3476 MEDMREEKTYGSECSKTSVSNEVDGCEISEENHEDEESKQNNINEGLSSSNSTIEENNEKKSSVRPYVRSKFPRLRWTPDLHLRFIHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVVDTNQVLADHRLLVDNGDKNVYNLSQLPMLQGYTPNQSSSYRCGYEPIMMERSNNHMVNMDHSIFQVDSSHFREQSSRSKVHEPNDNFLSFCGHDLQDHPRAQDLMLKDNLLANQVEPNTLKRKASDVEVDLDLSLKLNSRNYQGNIEEHEVDSKLSLSLYSQSSSSYLGSKMKEKDVSKEQGKIRGNNIVLDLTI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01311 325 MobiDBLite consensus disorder prediction 42 57 - -
Car03g01311 325 SUPERFAMILY Homeodomain-like 73 127 IPR009057 -
Car03g01311 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 11 175 IPR044848 GO:0003700
Car03g01311 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 250 325 IPR044848 GO:0003700
Car03g01311 325 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 73 128 IPR006447 GO:0003677
Car03g01311 325 Pfam Myb-like DNA-binding domain 75 125 IPR001005 -
Car03g01311 325 MobiDBLite consensus disorder prediction 1 65 - -
Car03g01311 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 129 IPR017930 -
Car03g01311 325 PANTHER - 11 175 - -
Car03g01311 325 PANTHER - 250 325 - -
Car03g01311 325 Gene3D - 73 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01311 Car-Chr3 58021066 58023511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01311 53 129 G2-like Transcription Factor Family AT2G42660 65.517 6.25e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car03g01311 Myb_DNA-binding 6.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01311 - - cam:101498576 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01311 03 58021066 58023511 Car03g01311 03 58021066 58023511 ECH