Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01306 ATGAAGACCCGTTCAGCCACCATATTCATCATCGTCGTTGCCATGTGTTTCCTCTTAAATTCGGAAGCCAAAACAACGGACCCCTACAAGGTTCTTGGGGTTGATAAAACTGCAAGTCAGAGAGAAATTCAGAAGGCGTTTCACAAACTCTCTCTTCAATATCACCCTGACAAGAACAAGGCCAAGGGTGCACAAGAGAAGTTTGCTCAAATAAATAATGCATACGAGATTTTATCTGATGAGCAAAAGAGGAAGAATTATGACTTATATGGAGATGAGAAAGGAAATCCAGGATTTGGAGCTGGCCATCCTGGAGGTCAGGGTGGTCCAGGAAGCTTTACCTTCCGACCAGGAGAACAATGGGGTAGCGGTGATCAGGGAAGCTCGAAGTCATTCTCGTTTTCCTTTGGCGGTTCTGGTGATTCAAATTCTTTTGGATTCGGTTTGGATGATATTCTTGGAAATTTTTTTGGTGGTGGTTTTGGGCCTTTTGGCAGTTCATTTAGTTCTCAATCTGGGTCCAAGAGTACCCCTAAAAGTTTTAGATCCTTAACTTCAAATATCTACAAGAAAGAAATTATTGATGAAGGAATGACTTGGCTTTTGTTATCTTATGCACCTTCATTGAGGGGCATCCAACACTTTGAGTCCATTATAGGGGAGGTTTCCGGTACATTGCAAGGAGCTTTGAAGGTTGGAAACATAAACTGTGAAAAGGAAGCCTCATTCTGTAAGGAGCTTGATGTATATCCGCGCAAAGCTCCAAGGCTTTTTGTTTATTCTTACAAGGAGAATGAAAAGGGTTCTCTAGTGGAGTATGGTGGTGACTTGGCTGTTAAGGACTTGAAGGCCTTCTGTCAACAACACTTGCCAAGGTTTTCAAAACGGATTGACTTGAATCAACTTGATCAATACAGCACGACTGGAAAATTGCCTAGGGTGCTGCTTCTCTCCACCAAAAAGGACACTCCTGTAATTTGGCGTGTTCTTAGTGGCTTGTATCGCAAACGCCTTACTTTCAGTGATGTAGAGGTTCATGATGTTTCTGATCCGAGAGTGAAAAAGCTAGGAGTTGATGCACTTCCAGCTATTGTAGGTTGGCTACCTAACGGAGAAAAGCTTATTCTGAAAACTGGGATTTCGGTGAAAGATATAAAATCTGCTGTACATGATCTTAGTAACATACTTGATAGTTTTGAGAAAGAAAGTAAAAAGCAAACATCAAGTCAGTCCAAGAAAGCACAAGCTGATCCAGAAGATAGCCACATTCAGTTGCTTTCTCGGTCAAACTTCGATGCTCTCTGTGGGGAGAAAACTCCAGTTTGCATAATTGGTGCCTTCAGATCTTCAAAAGCAAGGGAAAAGCTAGAATCACTTCTCACTTTGGTCTCACAGAAGTCCTTGTCAAGAAAACCAAATCGAGGAGGCAGCTCTAGGGACTCCATTTCCTATGCTCTTTTAGATTCTGCAAAGCAACAGTCCTTTCTAAACGCATTTGACAAAACAGGTTATAAATCGTCAGATAAGTTGTTGATTGCCTACAAACCTCGGAAAGGAAAATTCACTGTATTTATGGGTGAAACAACAATAGAGGAGGTAGAAAATTTTATCAGCTCCGTTTTAAGCGGAGACGTACCCTTTAGGGAAACACATAAGAAGCCTGTACTAAAATAG 1674 0.4152 MKTRSATIFIIVVAMCFLLNSEAKTTDPYKVLGVDKTASQREIQKAFHKLSLQYHPDKNKAKGAQEKFAQINNAYEILSDEQKRKNYDLYGDEKGNPGFGAGHPGGQGGPGSFTFRPGEQWGSGDQGSSKSFSFSFGGSGDSNSFGFGLDDILGNFFGGGFGPFGSSFSSQSGSKSTPKSFRSLTSNIYKKEIIDEGMTWLLLSYAPSLRGIQHFESIIGEVSGTLQGALKVGNINCEKEASFCKELDVYPRKAPRLFVYSYKENEKGSLVEYGGDLAVKDLKAFCQQHLPRFSKRIDLNQLDQYSTTGKLPRVLLLSTKKDTPVIWRVLSGLYRKRLTFSDVEVHDVSDPRVKKLGVDALPAIVGWLPNGEKLILKTGISVKDIKSAVHDLSNILDSFEKESKKQTSSQSKKAQADPEDSHIQLLSRSNFDALCGEKTPVCIIGAFRSSKAREKLESLLTLVSQKSLSRKPNRGGSSRDSISYALLDSAKQQSFLNAFDKTGYKSSDKLLIAYKPRKGKFTVFMGETTIEEVENFISSVLSGDVPFRETHKKPVLK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01306 557 Coils Coil 61 81 - -
Car03g01306 557 Gene3D Glutaredoxin 168 289 - -
Car03g01306 557 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Car03g01306 557 CDD DnaJ 27 80 IPR001623 -
Car03g01306 557 Coils Coil 382 402 - -
Car03g01306 557 MobiDBLite consensus disorder prediction 89 133 - -
Car03g01306 557 PRINTS DnaJ domain signature 29 47 IPR001623 -
Car03g01306 557 PRINTS DnaJ domain signature 47 62 IPR001623 -
Car03g01306 557 PRINTS DnaJ domain signature 63 83 IPR001623 -
Car03g01306 557 PRINTS DnaJ domain signature 83 102 IPR001623 -
Car03g01306 557 SUPERFAMILY Thioredoxin-like 181 291 IPR036249 -
Car03g01306 557 MobiDBLite consensus disorder prediction 119 133 - -
Car03g01306 557 SMART dnaj_3 26 83 IPR001623 -
Car03g01306 557 PANTHER DNAJ PROTEIN ERDJ3A 6 557 - -
Car03g01306 557 ProSiteProfiles dnaJ domain profile. 27 91 IPR001623 -
Car03g01306 557 PANTHER DNAJ PROTEIN ERDJ3A 6 557 - -
Car03g01306 557 Pfam DnaJ domain 27 88 IPR001623 -
Car03g01306 557 Gene3D DnaJ domain 24 166 IPR036869 -
Car03g01306 557 SUPERFAMILY Chaperone J-domain 23 111 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01306 Car-Chr3 57940090 57943322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01306 29 90 C2H2 Transcription Factor Family AT1G74250 42.647 3.05e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01306 - - gmx:100796871 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01306 03 57940090 57943322 Car03g01306 03 57940090 57943322 ECH