Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01301 ATGATTTTCACTCACCGTCTAATTTTTCAGTTAGGTGCTATCACCATGTCTAAGCGAACGTTTGGGGATATAATTGGGGAAGGAGGTTCAAGTTCTAGTTCTTCAAAAGAGTTTGATAGCATTCAAAGCTATAGATATATAtacgatgtgtttataagttttagaggtgttgatacacgcaacaccttcgttgatcatctctatgctcatctcataagaaaaggtatttttgttttcaaagatgacaaacagctccataaagggaattccatttcacgccaacttctacaagcaattcaacattcacgtatttctattattgtcttctcaaaagattatgcttcctcaacttggtgtttggatgaaatggctgctattgctgaatgccatagggaactgaaacaacctgtttttcctattttctatgatgtggatccttcttgtgtccgaaaacagattgggTTGTATGAGAGTGCCTTTTTATTACTCGCCGAACAATTCAAACATGATCCACACAAGGTTGATGGGTGGAAGAGAGCTATGACCTGTTTGGGTGGATCAGCTGGTTGGGATGTCAGGAATAAGCTAGAGTTTGAAGAGATTGAGAAAATTGTTCAGGCTGTAATAAAAACACTGGGTCATAAATTCTCTGGGTTTGCTGATGACCTTAttggaatgcaacctcgtgtagaagcattaaaaagtatattaagattaagctcagaggatgatggttttcgagttttaggaatatgggggatgggtggcataggaaagacaactcttgcgaccgtcttgtatgacacaatctcacattactaccaatttggtgcttgttgttttatcgagaatgtcagcacaatttatagagatggtggggccactgctgtacaaaaacaaattcttcgtcaaactctgaaagaaaaaaatctggatgcatacagttcttccgaaatatctggaattataataaataggctatacaacaggaagctccttgtggttcttgacgatgttgatcaatttgagcaactacaagaattgcacataaatcccaaattgcttcgtccaggaagtagaataatcataaccacaagagatatgcatattcttgaattgtatggagtggatagaatttatgaggctgaattgatgaatgataacgacgctcatgatcttttgtgtagaaaagccttcaaaagtgataattcaagaagcccttttgtagaactaattcctaaggtactaaaatacactcaaggtcttcccctggcaattagaataatgggttctttcctttttaaccgaaatgccatgcagtggagagctacctttgatggattgcaaaataatccagataaaagaatcatgaaagtgcttcagatgagttttgagggactacaactaagagaaagagaaatatttttgcatgttgcttgtttctttgaaggggagagggaggattatgtaagacgtattctacatgcttgtggattgcaacctaatattggaattccactcatagctgaaaaatccctcataaccattaggaaccaggtaatttgtatgcataaaatgttgctggagttggggaagcaaattgttcaaggacaacatctcgacgagcctagattctggaatagattatgGCTTTATCGGGATTTCCATCATGTGATGATGACCAAAGTGGAAGCAACAGAAACTAAAGCCATAGTTCTAGATCAAAAGGAGGATGGTTTCAAATTCAGTAAGTTACGGGTTGAagatttatcaaaaatggagcacctaaaactactcatattaaatcacaagaatttttcaggaaaacccatatttctttcaaattctctatactatttttcatggaatggttaccctttcactgcgttaccatcaaattttcaaccatacgaccttgttgaattgaatatgcccgacagcaacatcgaacaattatggGAAGGCATCCAGTGTCTACCCTGTTTGAAAAGGATGGATCTGAGCAACTCTAAAAATCTGAAGATGACTCCATGTTTTGATGGAATCCTAAACCTTGAGCGGCTAGATCTTACAGGATGCATAAACTTGTTGCAGGTGCATCCATCAATTGGACTTCTTTCAGAACTTGTATTCTTGAGTTTGCAGAAATGTAGTAGTCTGGTCCACCTCGATTTCGGCAGTGCATCAAGGCTATGGTCTCTGAGAGTTTTACTTCTATCTGGTTGCACAAAACTTAAAAGCACTCCAGATTTCACAGGAGCAATAAATCTTGAGTACCTTGATGTGGATCATTGTGCAAGTTTATTCACATTTGATGGATCTCTTGCAAAGCTTAGAGTCTTAAGTTTGAGAGACTGCACAAATCTTGTTAGACTAGGTGATAGCCTTGATAAAATGACATCTCTTACAACTTTGGATCTATGCGGCTGCTTGAAATATAAGTGTCTGCCTGTCAATTCTGCTATGAAATCTTTGGTTTTTCTAGATTTAAGCTTTTGCAATATTTCTAATTTACCTCAGGCTATTGGAGAATTAAGGGGTTTAGAGAGACTAAATTTACAGGGAAATAACTTCACTGCAATTCCTTCTCTCCAATGCCTTTCCAATCTAGCATATTTAAACTTGTCATATTGTCATTGTCTTCAACGTTTGCCGCAGCTCCCAACAACAAGCGGTCCATCAGATTCAATGGGAATATATTTTAAAACAACATCTGGATCACGTGATCACAGATCAGGATTATATGTTTTTGACTGTCGTAAAATATTTGGTGGATCCATATGGATATCTTCTATAGACCATCAATATGAATGGCTACAAAGACTATTAAAGGAACCTCGTCATTTTCGGTGTGGCTTTGACATTGTTCTTCCTTTTCCTTGTTATGGTTCGGCAGAAATTCCAATGTGGTTCGATCACCGATATAAAGGTGGTTCAATAATAAGGATAAAAAACTTTGATGTGAATGTCGATTGGGTTGGTTTTGTCTTTTTTGTACAATTTGAGGTAAGATACCCAATGCCAAATTCTGCAAGTTCTCAACATCCATATCCTTTCTATCTTTCATTTGAAAGTGAACACACAGAAGAACGATTTGATATGCCACTTAGTTTGAAATCAAACAAGGTTGATGGCTCACCGTCAGAGTATTGTTGGACAATCTATATCTCTCAGGAACACTGCCATTTTGTGAAAACAGAAGCACAAATCACATTTAAAGCCTACCAAGGTTTGATTATGAAGGAGTGGGGGTTCCACATGCTAACCGAGAAAGAGAGAAAATACGTGGATCAGTCAAACATGAAGAAGATCCGTCTTTGGAACATGCCCAGGAAAGACATGAAAGACATGCTGACAAGAGGAACACGATTACAAATTGAGAAAGTAGGAGAAAGCAACTTCAACAACAACAACATTGGGACCAAAATCCAGCTTCCTTACAATTGGTTAGTATCTAGTGAAGATGATGTTGAGAATGATGAAGCTAAGGGGAAAGAAATTAGTCTCTTCAACCTAGGCCTTTAG 3525 0.2218 MIFTHRLIFQLGAITMSKRTFGDIIGEGGSSSSSSKEFDSIQSYRYIYDVFISFRGVDTRNTFVDHLYAHLIRKGIFVFKDDKQLHKGNSISRQLLQAIQHSRISIIVFSKDYASSTWCLDEMAAIAECHRELKQPVFPIFYDVDPSCVRKQIGLYESAFLLLAEQFKHDPHKVDGWKRAMTCLGGSAGWDVRNKLEFEEIEKIVQAVIKTLGHKFSGFADDLIGMQPRVEALKSILRLSSEDDGFRVLGIWGMGGIGKTTLATVLYDTISHYYQFGACCFIENVSTIYRDGGATAVQKQILRQTLKEKNLDAYSSSEISGIIINRLYNRKLLVVLDDVDQFEQLQELHINPKLLRPGSRIIITTRDMHILELYGVDRIYEAELMNDNDAHDLLCRKAFKSDNSRSPFVELIPKVLKYTQGLPLAIRIMGSFLFNRNAMQWRATFDGLQNNPDKRIMKVLQMSFEGLQLREREIFLHVACFFEGEREDYVRRILHACGLQPNIGIPLIAEKSLITIRNQVICMHKMLLELGKQIVQGQHLDEPRFWNRLWLYRDFHHVMMTKVEATETKAIVLDQKEDGFKFSKLRVEDLSKMEHLKLLILNHKNFSGKPIFLSNSLYYFSWNGYPFTALPSNFQPYDLVELNMPDSNIEQLWEGIQCLPCLKRMDLSNSKNLKMTPCFDGILNLERLDLTGCINLLQVHPSIGLLSELVFLSLQKCSSLVHLDFGSASRLWSLRVLLLSGCTKLKSTPDFTGAINLEYLDVDHCASLFTFDGSLAKLRVLSLRDCTNLVRLGDSLDKMTSLTTLDLCGCLKYKCLPVNSAMKSLVFLDLSFCNISNLPQAIGELRGLERLNLQGNNFTAIPSLQCLSNLAYLNLSYCHCLQRLPQLPTTSGPSDSMGIYFKTTSGSRDHRSGLYVFDCRKIFGGSIWISSIDHQYEWLQRLLKEPRHFRCGFDIVLPFPCYGSAEIPMWFDHRYKGGSIIRIKNFDVNVDWVGFVFFVQFEVRYPMPNSASSQHPYPFYLSFESEHTEERFDMPLSLKSNKVDGSPSEYCWTIYISQEHCHFVKTEAQITFKAYQGLIMKEWGFHMLTEKERKYVDQSNMKKIRLWNMPRKDMKDMLTRGTRLQIEKVGESNFNNNNIGTKIQLPYNWLVSSEDDVENDEAKGKEISLFNLGL 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01301 1174 Gene3D - 45 218 IPR035897 -
Car03g01301 1174 Pfam Leucine rich repeat 825 879 IPR001611 GO:0005515
Car03g01301 1174 Pfam NB-ARC domain 238 456 IPR002182 GO:0043531
Car03g01301 1174 ProSiteProfiles TIR domain profile. 46 212 IPR000157 GO:0007165
Car03g01301 1174 Gene3D - 219 376 IPR027417 -
Car03g01301 1174 SMART till_3 47 187 IPR000157 GO:0007165
Car03g01301 1174 SUPERFAMILY Toll/Interleukin receptor TIR domain 39 190 IPR035897 -
Car03g01301 1174 ProSiteProfiles Leucine-rich repeat profile. 847 868 IPR001611 GO:0005515
Car03g01301 1174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 660 IPR044974 GO:0006952
Car03g01301 1174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 666 886 IPR044974 GO:0006952
Car03g01301 1174 Pfam Leucine Rich Repeat 638 657 IPR011713 -
Car03g01301 1174 SUPERFAMILY L domain-like 588 886 - -
Car03g01301 1174 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 50 660 - -
Car03g01301 1174 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 666 886 - -
Car03g01301 1174 Pfam TIR domain 48 214 IPR000157 GO:0007165
Car03g01301 1174 Gene3D - 385 468 IPR042197 -
Car03g01301 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 477 IPR027417 -
Car03g01301 1174 SUPERFAMILY "Winged helix" DNA-binding domain 455 558 IPR036390 -
Car03g01301 1174 PRINTS Disease resistance protein signature 773 789 - -
Car03g01301 1174 PRINTS Disease resistance protein signature 326 340 - -
Car03g01301 1174 PRINTS Disease resistance protein signature 248 263 - -
Car03g01301 1174 PRINTS Disease resistance protein signature 419 433 - -
Car03g01301 1174 Gene3D Ribonuclease Inhibitor 572 752 IPR032675 -
Car03g01301 1174 Gene3D Ribonuclease Inhibitor 753 819 IPR032675 -
Car03g01301 1174 Gene3D Ribonuclease Inhibitor 820 898 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01301 Car-Chr3 57854278 57865439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01301 729 885 WRKY Transcription Factor Family AT4G12020 32.099 2.96e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01301 - - mtr:MTR_5g005550 1456.04