Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01287 ATGGAGGGtcatcacctccatcatcaacatcatcatcataatcaacaacaacaacaacaacaacaaagacaacatcaacaacaacaacaTAACATCATAGGTACTAGTAATGTTAACATGGATATCACGGATAGATTCCCTCAATGGAGCATCCAAGAAACAAAGGAGTTTCTTATGATCCGTTCAGAACTAGATCAAACTTTCATGGAGACAAAGAGGAACAAACTACTTTGGGAAGTGATTTCTAACAAGATGAAGGAAAAGGGTTATCTTAGAAGTCCAGAACAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATGTGAAACTATGGAGCTAGAGTCTAGGCAACAATTTCCATTTTACAATGAGCTTCAAGCTATTTTCACATCAAGGATGGAGAGAATGCTTTGGGCTGAAGCTGAAGGAGGGTCAAAGAAGAAAGGTGTGCATGTGTCTTCTGAAGATGATGAAGAGTTATTAGGCAATGAAGAGAGTGAGGGAGATCATAAGGGTAACATTAGGAAAAAGAAGAGAAAAAAGGGTAAAATGGTAATTGGTGGAGGAAATATTGATAGTGGTAGCATTAGCAATAGTTTGAAAGAGACACTTGAGGAGTTTATGAGGCAACAAATGCAAATGGAAGCTCAATGGATGGAAGCATTTGAGGCAAGAGAGAATGAGAGGAGGTTGAAGGAAATGGAGTGGAGACAAACAATGGAAGCATTGGAGAATGAGAGGATAATGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGAAGGGTTAGAGAAGAAGCTAGGGCTGAAAAAAGAGATGCATTAATCACAGCTCTTCTTGACAAGCTCACAAGAGAAGATATGTAG 876 0.3596 MEGHHLHHQHHHHNQQQQQQQQRQHQQQQHNIIGTSNVNMDITDRFPQWSIQETKEFLMIRSELDQTFMETKRNKLLWEVISNKMKEKGYLRSPEQCKCKWKNLVTRYKGCETMELESRQQFPFYNELQAIFTSRMERMLWAEAEGGSKKKGVHVSSEDDEELLGNEESEGDHKGNIRKKKRKKGKMVIGGGNIDSGSISNSLKETLEEFMRQQMQMEAQWMEAFEARENERRLKEMEWRQTMEALENERIMMEQRWREREEQRRVREEARAEKRDALITALLDKLTREDM 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01287 291 PANTHER - 1 289 - -
Car03g01287 291 Coils Coil 200 220 - -
Car03g01287 291 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Car03g01287 291 MobiDBLite consensus disorder prediction 15 29 - -
Car03g01287 291 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 289 - -
Car03g01287 291 MobiDBLite consensus disorder prediction 149 199 - -
Car03g01287 291 CDD GT1 47 112 - -
Car03g01287 291 Gene3D - 49 110 - -
Car03g01287 291 Coils Coil 236 263 - -
Car03g01287 291 ProSiteProfiles Myb-like domain profile. 49 105 IPR001005 -
Car03g01287 291 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01287 Car-Chr3 57653026 57654830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01287 25 289 Trihelix Transcription Factor Family AT2G38250 56.115 2.05e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car03g01287 Myb_DNA-bind_4 5.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01287 - - gmx:100778195 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01287 03 57653026 57654830 Car03g01287 03 57653026 57654830 ECH