Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01283 ATGGGTTCTACTCGGTCACATGGCTCTTCCACACACAAAGAACGCTTACGATGGACACAACAACTCCATGATCGCTTTGTGGAGGCTGTTAATAGACTTGGGGGCCCTGATAGGGCAACACCAAAGGGTATATTGAAGGGAATGAAGGCTATGGGGATTTTAGAATTGAGCATTTATCACGTCAAAAGTCACTTGCAGAAATACAGGATTTCCAAATTGATTCCAGAGTCCACCACAAGAGGAAAAATTGAGAAGAGAAGCATATCAGATATACTGCCAAATTTTTGTTCTATATCTGCTCTTCAATTAAAGGAAGTCCTACAAATGCAGGCAGAGGTGCAAAAACGCATCACTGACAGACTTGAGGTTCAAAAAAGCTTGAAGCTGAAAATTGAAGCACAGAGAATTTATCTAGAGAGATTTGGACAAAGTAATCAAAGAACAACAATTACAAGAAAAACTTGCAAGCCTTTTGTCGGTACATCTACACCTCTGCCCTCTCTTTCTAAGGATTCTGAATCCTTAAGAACACAATCTGAGGAAGAACATCAAACAACCATAAAGCAAAAGATCATAGACGAGGATGTTTTTCTTACAGGTTTTGAACTAGGATCTTCCACCAATCAAGAATTCTACAACCAAACCTGGAATCTTTCTTGGAGTCAGTTGGCTGCAGCAACATGCCAATCACCTTTGGTACCTAGTTTCATATTGTAG 717 0.4003 MGSTRSHGSSTHKERLRWTQQLHDRFVEAVNRLGGPDRATPKGILKGMKAMGILELSIYHVKSHLQKYRISKLIPESTTRGKIEKRSISDILPNFCSISALQLKEVLQMQAEVQKRITDRLEVQKSLKLKIEAQRIYLERFGQSNQRTTITRKTCKPFVGTSTPLPSLSKDSESLRTQSEEEHQTTIKQKIIDEDVFLTGFELGSSTNQEFYNQTWNLSWSQLAAATCQSPLVPSFIL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01283 238 Gene3D - 12 73 - -
Car03g01283 238 Pfam MYB-CC type transfactor, LHEQLE motif 102 141 IPR025756 -
Car03g01283 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 73 IPR017930 -
Car03g01283 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 190 IPR044848 GO:0003700
Car03g01283 238 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Car03g01283 238 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 190 - -
Car03g01283 238 SUPERFAMILY Homeodomain-like 12 70 IPR009057 -
Car03g01283 238 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01283 Car-Chr3 57495429 57499074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01283 9 155 G2-like Transcription Factor Family AT4G28610 45.752 1.37e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car03g01283 Myb_DNA-binding 3.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01283 - - pvu:PHAVU_008G103100g 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01283 03 57495429 57499074 Car03g01283 03 57495429 57499074 ECH