Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01270 ATGGCAACTTCAGAGGTTGTTAATGGCAACAACACAAATGAGACCAAAGGAAAAACCATTACTTGCAAAGCTGCTGTGGCACATGGTCCTGGAGAACCCTTTGTAGTGGAAAAAATTGTTGTGCAATCTCCTAAGAAAATGGAGGTTCGAATTAAGATCCTCTATACTTCAATATGCCACACTGATCTTAGCGCTTGGCAAGGCGAGAATGAATCTCAACAAGCTTATCCTCGCATTTTTGGTCATGAAGCTTCTGGGGTTGTGGAGAGTGTGGGTGAAGGAGTGAGTGACATGAAAGAAGGGGACATGGTGGTGACAATATTCAATGGAGAGTGTGGTGAGTGTATGTATTGCACGTGCGAGAAAACCAACATGTGTGAAAAGTTTGGGGTAAACCCTATGAAGAAGGAGATGTGTGATGGAACAAGTAGGTTCTCAACAATAGAAGGAAAACCAATATTTCATTTCTTAAACACTTCAACATTCACGGAGTACACGGTGGTTGATTCAGCTTGTGTTGTCAAACTCCACCCTCAACCCACCGCTACCCTCAAAAACCTCACCTTGCTTAGTTGTGGAATTTCCACCGGAGTTGGAGCTGCTTGGAATACTGCTAACGTCCATGCTGGTTCATCTGTAGCAATTTTTGGTTTAGGTGCAGTTGGGCTCGCTGTTGCAGAAGGGGCACGAGCTAGAGGTGCTTCCAAAATAATAGGTGTGGATATCAACCCAGACAAATTCATCACAGCCCAATCAATGGGAATCACAGACTTCATAAATCCGAAGGATGAGGTGAAGCCAGTATATGAGAGAATCAGAGAAATGACTGGAGGAGGTGTACACTACAGTTTTGAATGTACAGGGAACTTGCACGTTCTAAGGGATGCCTTCTTGTCTGTTCATGAGGGTTGGGGATTGACTGTAATATTGGGAATTCATACATCACCAAAGTTGCTTCCTATCCACCCAATGGAACTCTTTGATGGTCGCAAAATTGAAGCATCAGTTTTTGGAGGTTTCAAAGGCAAAAGTCAATTGCCTAATCTTGCCACAAAATGCATGCAAGGAGTGATAAACCTGGATAATTTCATCACTCATGAACTTCCCTTTGAGGAGATAAACAAAGCCTTCGATCTTTTAATTTCCGGGAAGTCACTTAGATGTCTTCTGCACCTCTAA 1179 0.4309 MATSEVVNGNNTNETKGKTITCKAAVAHGPGEPFVVEKIVVQSPKKMEVRIKILYTSICHTDLSAWQGENESQQAYPRIFGHEASGVVESVGEGVSDMKEGDMVVTIFNGECGECMYCTCEKTNMCEKFGVNPMKKEMCDGTSRFSTIEGKPIFHFLNTSTFTEYTVVDSACVVKLHPQPTATLKNLTLLSCGISTGVGAAWNTANVHAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPDKFITAQSMGITDFINPKDEVKPVYERIREMTGGGVHYSFECTGNLHVLRDAFLSVHEGWGLTVILGIHTSPKLLPIHPMELFDGRKIEASVFGGFKGKSQLPNLATKCMQGVINLDNFITHELPFEEINKAFDLLISGKSLRCLLHL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01270 392 Pfam Alcohol dehydrogenase GroES-like domain 48 175 IPR013154 -
Car03g01270 392 PANTHER ALCOHOL DEHYDROGENASE 15 391 - -
Car03g01270 392 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 81 95 IPR002328 GO:0008270|GO:0016491
Car03g01270 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 187 356 IPR036291 -
Car03g01270 392 SUPERFAMILY GroES-like 341 391 IPR011032 -
Car03g01270 392 Pfam Zinc-binding dehydrogenase 220 339 IPR013149 -
Car03g01270 392 SUPERFAMILY GroES-like 15 216 IPR011032 -
Car03g01270 392 Gene3D - 197 335 - -
Car03g01270 392 Gene3D - 25 387 - -
Car03g01270 392 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 15 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01270 Car-Chr3 57166607 57175005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01270 48 381 Monolignol Biosynthesis Gene Families AT2G21890 25.595 2.65e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01270 K00001 - gmx:100787307 607.831